Caldicellulosiruptor obsidiansis: COB47_1332
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Entry
COB47_1332 CDS
T01293
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COB47_1332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1332
Enzymes [BR:
cob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COB47_1332
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COB47_1332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecG_wedge
Helicase_C
DEAD
ResIII
RecG_dom3_C
Cas3-like_C_2
SNF2-rel_dom
tRNA_anti-codon
IstB_IS21
AAA_30
ERCC3_RAD25_C
SLFN-g3_helicase
nSTAND3
DUF3638
MEDS
Motif
Other DBs
NCBI-ProteinID:
ADL42624
UniProt:
D9TKU2
LinkDB
All DBs
Position
complement(1450337..1452376)
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AA seq
679 aa
AA seq
DB search
MNVLEKDIRFLKGVGENRERLFKKLGIKKAEDLLWHIPRKYLDYSKLKKIRELCNGEIES
FVAKVAGKPVEIETKSVKIIKIPVEDSTGVVTTVWFNQDYIKNVLKEGEIFCFSGKIERK
GFYIEVKNPEFEKYDQHLLHTGRIVPVYNSTEGLSQKVIRNIVNNLLQQVDGALIDIIPP
YIRQKYNLSEINFAIKNIHFPENKLSLELARKRLVFEEFYLLQLSLLLLKENIEKNEGLK
IENAQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASA
YATIKAGYQVALMAPTEVLALQHYNECKKYFGNKFNVRLLIGSTPKKEKEIILKEIEHGL
CKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELTKKGSSPNILVMTATPIPRTL
SLVLYGDLDISIIDQLPPGRKKILTYAVDESFRQRVYNFIKKQLDEGRQVYWICPLIEES
ETLNAKSAVEFAKSLKEGFFKDYNIGCLHGKLSVKERDKILNDFKDGYIHILVSTTVVEV
GINVPNATVMVIENAERFGLAQLHQLRGRVGRGEHQSYCILFNQSDSEIAKKRMIAITRS
QNGFEIAEMDLKLRGPGDLFGTKQHGVMNFKVADIINDMDILKQARIAAEETIRLNLVDN
KLLEKINKQFYNNIENIGL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcttgaaaaagacataagattcttaaaaggtgttggagaaaacagagaaagg
ctatttaaaaagctgggtataaaaaaagccgaggatttgctctggcacataccccgaaaa
tatcttgattatagtaagctaaagaaaataagagagctttgcaatggtgaaatagagtca
tttgttgcaaaagttgctggcaagcctgtggagatagagacaaagtcagtaaagataata
aaaattcctgttgaagatagtacaggcgttgttacaacagtatggtttaaccaggactat
ataaaaaacgttttgaaggaaggagagatattctgcttttctgggaagatagagagaaaa
ggcttttatattgaggtcaaaaatcccgaatttgagaaatatgaccaacatcttcttcat
acaggcaggattgttcctgtatacaattctacagaaggtctttctcaaaaggtgattaga
aatattgtgaacaatcttctgcagcaagttgatggagcacttatagatataattccgcct
tatataaggcaaaaatataatttgagtgaaatcaattttgcaataaaaaatattcatttt
ccagaaaacaaattgagcttagaacttgcaaggaaaaggcttgtgtttgaagaattttat
cttcttcagctttcccttttgcttctaaaagaaaacatagaaaaaaacgaaggattaaaa
attgaaaatgcacaaagtagcttaaaagagtttgaaaagcttctgccgtttgagttgacc
gaggcacaaaaaagagtgctggcagagattgcacaggatttagagagtacaaaacagatg
aacagactcatccaaggcgatgttggctgcgggaaaacggttgtagctttggcaagcgca
tatgcaacaataaaagcgggatatcaggttgcactgatggcaccaacagaggttttagct
ttgcagcattataacgaatgtaaaaagtattttgggaataaatttaacgtaagacttttg
attggatcaactccaaaaaaagaaaaagaaataattttaaaagagattgaacatggactt
tgcaaaatggtcattggaactcatgctcttatccaagatgaagtaaaatttaaaaacctt
ggcttagcaatcactgatgaacaacacagatttggagttatccaaagggtagaactcaca
aaaaaaggaagttcgccgaacattcttgttatgacagcaactccaatacccagaactttg
agtttggttttgtatggagaccttgatatttctattattgaccagttacctcccggcaga
aaaaagattttgacatacgctgttgatgagagttttcgccagcgggtgtataattttata
aagaaacagttagatgaaggaaggcaggtttactggatatgtcctctgattgaagagtca
gaaactttgaatgcaaaatcagcagttgaatttgcgaaatccttaaaagaaggatttttt
aaagactacaatattgggtgtctgcacggaaaactttctgtaaaagagagagacaaaatc
ttaaatgattttaaagatggatacattcatatattagtttcaactacagttgttgaggtt
ggaataaacgttccaaatgcgacagtaatggtgattgagaatgctgaaagatttggactt
gcccagctgcatcagctaagggggcgagttggcagaggcgagcaccagtcgtactgtatt
ttgtttaatcaaagcgattcagaaattgccaaaaaaaggatgatagctataaccagaagt
cagaacggatttgaaattgctgaaatggatctaaaacttcgaggacctggtgatttgttt
gggacaaaacagcacggtgttatgaactttaaagtagccgatatcataaatgatatggat
attttaaaacaagcgagaatagctgcagaagagactattagactcaatcttgttgataac
aaacttttagagaaaatcaacaaacaattttacaataatatagaaaatattggcctttaa
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