Caldicellulosiruptor obsidiansis: COB47_1390
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Entry
COB47_1390 CDS
T01293
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1390
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COB47_1390
Archaeal homologous recombinant proteins
COB47_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
GAS
AAA_29
AAA_27
OmpH
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADL42680
UniProt:
D9TKZ8
LinkDB
All DBs
Position
complement(1504612..1507185)
Genome browser
AA seq
857 aa
AA seq
DB search
MRPLFLRIENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG
KRGKVAETEYINSHRDYMQVEFEFELNKTIYKVVRRLDRKGKKYLSLFVRKGDSLIPINE
ATYTQTQVKLQNILGIDFNVFLHSAYLSQKRTEDFLLSSPEDRREVFAKILNLSIYDRIN
ELAKEKRKEKKVLLDIKNREIEEENKILSEKESIKSLVADLEKKRTTIEAELNGLRNRLN
TLISKRSEIEQKLDILNQKKNEMIELQRKAEEIRYKFDTARKELLKIEEKLKEEDKITAM
VKEYEMIKEEVELKRKDYEKYLELKNKMVLCERDIKSKIEQKKIFEKNIEESNLQLNKET
SEISKYEEEMKKVEVEISKIENELGKVKQYKQEQEKKREEIVEHEKSLEVVENKLKELAS
SYRLIEANQGRCPVCLRQINGQEEKEHIKNEIAAQGKEFKQRRDSLTKKLEILRKEFSEL
EEKIKNEEVLRTREKKLHGMLENLKAKMGQKTQNISNLQNSIVQVNQSIKLCEEEIERLK
EEMTYLKREISILNFDENYYTQLLQREKELEIYQRLFSELTVNKVKAENLKKEILEYQEQ
EKEILKKVEDLKQEIANLSTFAHAVMLEKVKSDILTCESKIKNLQESLNSVLKELGILEQ
KLNQIEEAKEKLSRLESEIEEMKKKIEIYDIIIDITGPDGIKNEIIANTLPQIRDEANKL
LKILTNGAFSIDFKTQRETASGKTIETLQIEISDANGTRNYELFSGGELFRINFAIRIAL
SKVLLKRSGASIRMLILDEGFGSQDEEGKDHIVECLNRIKDQFDTILVITHIEDLLDAFD
QKIVVKKDMEGSKIFVI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgagacctctttttttgaggattgaaaatttcaaatcatataaggatactcagaacgaa
attgattttagcaatataaaggttgcttgtatcataggcaaaaatggcaatgggaaatct
tctattgctgaggcaattgcctgggcgctttttggcgagtttgaaagacttcaaacagga
aaacgaggaaaagttgcagaaacagagtatataaactcacatagggattatatgcaggtt
gaatttgaatttgagttgaataagaccatatataaagttgtgagaagacttgacagaaaa
ggcaaaaagtatctttcactctttgttagaaaaggagacagtctcatacctataaatgaa
gcaacttatacccagactcaagtaaagcttcagaatattttggggatagattttaacgta
tttttgcactcagcatatctttctcaaaaacgaacagaagattttttgttgtcatcccct
gaagacaggcgtgaagtttttgcaaagatattgaacctgagtatatatgacaggataaac
gaacttgcgaaagaaaaacgaaaagaaaaaaaggttttgctagatataaaaaacagagaa
atagaggaagaaaataaaattttatcagaaaaagagtctataaaatctttggtggctgat
ttggaaaagaagagaaccacgatagaagctgaattaaacggtttgagaaatagactaaat
acccttatttcgaagaggtctgaaatagaacaaaaacttgatatattaaatcagaaaaag
aatgaaatgatagaacttcaaagaaaagctgaggagataaggtataaatttgatactgca
agaaaagagcttttaaaaattgaagaaaaattaaaggaagaagataagataactgcaatg
gttaaagagtacgagatgataaaagaagaggttgaactcaagagaaaggattatgaaaag
tatcttgagctcaaaaacaaaatggttttgtgtgagagagatataaaaagcaaaatagag
cagaaaaagatatttgaaaagaatattgaagagagtaatttacagctgaataaagaaact
tctgagatttcaaagtatgaggaagagatgaaaaaagtggaggtagaaatttcgaagatc
gaaaatgagctgggaaaagtaaagcagtataaacaggaacaagagaaaaaaagagaggaa
attgtagaacatgagaaatctttagaggtagtggagaacaaattaaaagagcttgcttca
agttacagacttatagaggcaaatcaggggaggtgcccagtatgcttgcgtcaaattaat
ggccaggaagaaaaagaacatataaaaaatgaaattgcagcccaaggaaaagaatttaaa
caaagaagagatagtttgaccaaaaaacttgaaattctgagaaaagagttttctgagctt
gaagaaaaaataaaaaatgaagaagttctgaggacaagagaaaagaagcttcacggaatg
ttagaaaatcttaaggctaagatggggcaaaaaacacaaaatatttcaaatctacaaaat
tcaatagttcaggtaaaccaaagcataaagctttgtgaagaagaaatagaaaggttaaaa
gaagagatgacatacctaaaaagagaaatttcaattttaaactttgatgagaattactat
acccagcttttgcaaagagaaaaagaacttgaaatatatcagagactttttagcgagctt
actgtgaacaaggtgaaagctgagaatttaaaaaaggagatacttgagtatcaagaacag
gaaaaagagattttgaaaaaggttgaggatttaaagcaggagatagcaaatttatctact
tttgcacatgctgtaatgcttgaaaaggtaaagtcagatattctgacctgtgaaagtaag
ataaaaaatcttcaagaaagtctcaattctgttttaaaagaattgggaatccttgagcag
aaactaaatcagattgaagaggcaaaagagaagctctcaaggcttgaaagtgaaatagaa
gagatgaaaaaaaagattgaaatatacgatataataattgatatcaccgggcctgatgga
ataaaaaacgagataattgcaaatacattgccgcaaataagagatgaggcaaacaaactt
ttgaagatcctgacaaatggagcattttcaatagattttaaaactcaaagagaaacagca
tctggcaaaacaatagaaacactccaaatagaaatttctgatgcaaatggtacaagaaac
tatgaacttttttcaggtggcgaacttttcagaataaattttgcgatcagaattgccctt
tcaaaggtactgcttaaaagatcaggtgcttccataagaatgctgattttagacgaagga
tttggttctcaggatgaagagggaaaagaccacattgttgagtgtctgaatagaatcaaa
gaccagtttgacactatacttgttataacccacattgaggatttattggatgcgttcgac
cagaagattgttgttaaaaaagatatggaaggctccaaaatttttgttatataa
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