Caldicellulosiruptor obsidiansis: COB47_1391
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Entry
COB47_1391 CDS
T01293
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1391
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COB47_1391
Archaeal homologous recombinant proteins
COB47_1391
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DUF5984
Motif
Other DBs
NCBI-ProteinID:
ADL42681
UniProt:
D9TKZ9
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Position
complement(1507213..1508475)
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AA seq
420 aa
AA seq
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MAIRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILEFIRENSIDLLLITGDIFK
DREPNSTLRNMFYKRVVDISKRGVLVAIVPGNHDMHPFETKDHSVRVFEIFDQPNIVVMD
RPFETREFEIRGEKLRIVAVPYLYLERFVDETFPQKTEEIDMIAANFFEKKLSQVLDSSE
DNIPTILAGHFTVVEAQIGSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQILHAAN
PTVLYCGSPDRIDFSEANDSKGFVVFEIDKESFRFKFQPVKVRPFCQLEIDVFEDEVENL
TKKLLDKIEEKVQMFEQNTSNSIQVSVVKLIIKTQSLIKEKIDVGLVERFLRDRCFVLAP
IEIEVVDSKKDFRIAEVDEKSDPVDAFEKFLSASQKYRGIENKDEVVSEFKKLLYEVQEK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaataagaggagttcatacagctgatcttcattttggtgtaacaacttacagccgc
gaaaccccggatgggcttggctcacgtgtacatgattttttcaaaacatttgacaggata
ctggagtttatacgagaaaacagtattgatcttttgcttataacaggcgatatttttaaa
gacagagaaccaaactctacgctgaggaatatgttttacaagagggttgtggatatttca
aaaagaggcgttttggtggcaatagtgccaggtaatcatgatatgcatccttttgagaca
aaagatcattctgtgagggtttttgaaatattcgaccagccaaacattgttgtgatggat
agaccttttgaaaccagagaatttgaaataagaggtgaaaaacttcgcattgtggctgtg
ccttacctttatcttgaaaggtttgtggatgagacatttcctcaaaagacagaagagatt
gatatgatagcagccaatttttttgagaaaaaactaagccaggttttggactcttcagaa
gataatattcctacaattcttgcaggacattttactgtagtagaggcgcagattggcagt
gaaagatcaattatgcttggcaaagacataaaggtgcctctttcttgccttttaaatcca
aagttaaaatttgttgccctgggtcacattcacaaacctcaaattttgcatgcagcaaac
cctactgtgttgtattgtggctcgcctgacaggatagatttttctgaagcaaacgacagc
aaggggtttgttgtgtttgagatagacaaagagagctttaggtttaagtttcaacccgtt
aaggtaagacctttttgccagttggagattgatgtgtttgaagacgaagtagaaaatctc
accaaaaagcttcttgacaaaatagaagagaaagtacaaatgtttgagcaaaatacttca
aatagtattcaggtgtcggttgtaaagctcataataaaaactcaaagtttgataaaagaa
aagattgatgttggacttgttgaaaggtttttgagagacagatgttttgttttagcgcct
atcgaaattgaggtagttgactcaaagaaagattttagaattgctgaggttgatgaaaag
tcagaccctgttgatgcatttgaaaagtttttatcagcaagccagaaatacaggggtata
gagaataaagatgaggttgtatcagaatttaaaaagcttttgtatgaagttcaagaaaaa
tga
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