Caldicellulosiruptor obsidiansis: COB47_1417
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Entry
COB47_1417 CDS
T01293
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COB47_1417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1417
Enzymes [BR:
cob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COB47_1417
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COB47_1417
RecFOR pathway proteins
COB47_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
Sigma54_activ_2
AAA_3
AAA_14
Sigma54_activat
nSTAND3
DUF815
TsaE
AAA_16
RNA_helicase
NB-ARC
AAA_18
AAA_22
MCM
Rad17
Parvo_NS1
AAA_17
AAA_28
NTPase_1
AAA_24
ABC_tran
ResIII
Bac_DnaA
NACHT
NPHP3_N
IstB_IS21
ATPase_2
AAA_PrkA
RsgA_GTPase
AAA_33
AAA_25
Torsin
Motif
Other DBs
NCBI-ProteinID:
ADL42707
UniProt:
D9TL25
LinkDB
All DBs
Position
complement(1534469..1535485)
Genome browser
AA seq
338 aa
AA seq
DB search
MERLLDNKFSVEDVHEETLRPKTLEDYIGQQKVKEKIKIFIEAAKKRKEPLDHVLLYGPP
GLGKTTLANIIANEMGVDIKVTSGPAIERAGDLVAILTNIGENNILFIDEIHRLNRTIEE
VLYPAMEDKKVDIVIGKGPSAKTIRLTLPPFTLIGATTRAGLLSSPLRDRFGIIERLDYY
TVEELSQIVMRSASILKCDIEKEACIEIAKRSRGTPRVANRLLRRLRDYATVKHTGSITY
EVAKNGLEMFEVDEYGLDLVDRNILEAIVYKFGGGPVGLSTIAAAIGEDEGTIEDIYEPY
LIQEGFLVKTARGRVATQKAINHIAKIKFRLKGSSDKR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactgcttgacaataaattttctgttgaagatgttcatgaggaaacacttcga
ccaaagacacttgaagattatataggtcagcaaaaagtgaaagaaaaaataaaaattttt
attgaagctgccaaaaaaagaaaagaacctcttgaccatgtactcttatatggtccgcct
ggtcttggaaaaacgactttggcaaacatcattgcaaatgagatgggagttgatataaaa
gtaacatctggccctgcaatagaaagagcaggcgacctggttgccattcttacaaatatt
ggtgaaaataatattctattcattgatgaaattcacagattgaacaggacaatcgaagag
gttttatatcctgcaatggaagacaaaaaggttgatattgtgattggcaaaggtccgtct
gcaaagaccataagattgactttgccaccttttacactcattggagcaacaacaagggca
ggtcttttgtcatcaccgctgagagacaggtttggaataatagaaagacttgactattac
acagttgaagagctgagccagattgttatgaggtctgccagcattttaaagtgcgatata
gaaaaagaagcatgcatagagattgcaaagcgctcaagaggaactccgagggttgcaaac
aggctacttagaagacttagagattatgccacggtaaagcacacaggaagtataacatac
gaggttgccaagaatggacttgagatgtttgaggtggacgagtatggacttgaccttgtg
gacagaaacatcttagaagcaatagtttacaagtttggcggaggacctgttggactttct
acaattgcagctgccattggagaagatgaagggacaattgaagatatatatgagccttat
ttgattcaagaaggctttctagtaaaaactgcgcgaggaagagttgcaactcaaaaagcc
ataaatcacatagcaaagataaagtttaggctcaaagggagcagtgataaaagatga
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