Caldicellulosiruptor obsidiansis: COB47_1419
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Entry
COB47_1419 CDS
T01293
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COB47_1419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1419
Enzymes [BR:
cob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
COB47_1419
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COB47_1419
RecFOR pathway proteins
COB47_1419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Pox_A22
Motif
Other DBs
NCBI-ProteinID:
ADL42709
UniProt:
D9TL27
LinkDB
All DBs
Position
complement(1536107..1536607)
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AA seq
166 aa
AA seq
DB search
MRVLGIDPGIALTGYGIIESKNGSEFKVIDYGKIETSSSFKKSMRFLHLYTELCSIISLY
QPDVVAIEELFFNKNSKTAITIGEARGVIILTCIQNNLSVYEYTPLQVKQSITGYGRADK
TQIQKMVKSLLGLSEIPKPDDVADALAVAMCHILSSSSVLYQEDEI
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagtacttggtattgaccctggaattgcgctgactggttatggaattatagagtct
aaaaatggctcagagtttaaagtaatcgactatggaaaaatagaaacttcgagcagtttc
aaaaagtcaatgagatttttacatctttatactgaactttgcagcataatttcgctgtat
cagcctgatgttgttgcaattgaagaactttttttcaacaaaaactccaaaactgccatt
acaattggtgaagcaagaggtgttattattctcacatgtattcagaataacctgagcgtt
tatgaatatactcctcttcaggtaaaacaatcgataactggatatggtagagcagataaa
actcaaatacagaaaatggtcaaaagtttgttgggattatctgaaattccaaaaccagat
gatgttgcagatgctttggctgttgcaatgtgtcatatactgtcaagctcttcggtactt
tatcaggaggatgaaatatga
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