Caldicellulosiruptor obsidiansis: COB47_1460
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Entry
COB47_1460 CDS
T01293
Name
(GenBank) 8-oxoguanine DNA glycosylase domain-containing protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COB47_1460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1460
Enzymes [BR:
cob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
COB47_1460
DNA repair and recombination proteins [BR:
cob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COB47_1460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH_2
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADL42749
UniProt:
D9TL67
LinkDB
All DBs
Position
complement(1573670..1574524)
Genome browser
AA seq
284 aa
AA seq
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MNIKEYTDFLRISGVEIDFDATFFSGQCFRWKKVDGGYIGVVNRKIVLVYPQDSNTFDIY
NCSPEEFKKFFYWYFDLDKDYDLILKELSEHDEILKKAVEKYRGMRLLNQEPFECMISFI
ISQNNNIKRIQMLVERLCQAYGEKIEYRGFSSWTFPEIENLKKISTEELKRLGLGYRAEY
IKDAIAKLDEGKIDFESLESLSSDEARKILKTVKGIGDKVANCILLYSLQKYDVFPVDVW
VKRALREYYGIENTKQLRQFINSFGELAGYAQLFLFHYIRNINK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgaacataaaagagtatactgattttcttcgcataagtggagtagagattgattttgac
gcaacattttttagcggacagtgttttagatggaaaaaggtagatggtggatacatagga
gttgtaaatagaaaaatagttttagtatatccgcaggatagtaatacttttgacatatac
aactgttcacctgaagagtttaaaaagtttttttactggtattttgacttggataaagac
tatgatttgattttaaaagaactttctgagcatgatgagattttgaaaaaggcagttgag
aagtacagagggatgagacttttaaatcaagaaccttttgaatgtatgatttcttttatt
atatctcagaataacaacataaaaagaattcaaatgctagtggaaagactttgccaggct
tatggggaaaaaatagaatacagaggattttcttcttggacatttccagaaattgagaac
ttaaaaaagatctcaacagaagaattaaaacgcttagggttaggttatagagcagagtat
atcaaagatgcaattgctaaattagatgaaggtaaaatagactttgaaagtcttgagtct
ttgagttctgatgaagcaaggaagattttaaaaacggtaaaaggaataggagacaaggtt
gctaattgtatattgctttactcactgcaaaagtatgatgtgtttcctgtggatgtgtgg
gtgaaacgtgccttgagagaatattatggaattgaaaatacaaaacagctgagacagttt
ataaattcgtttggtgaacttgcaggatacgctcagctttttttatttcactatattagg
aacatcaataaataa
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