Caldicellulosiruptor obsidiansis: COB47_1471
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Entry
COB47_1471 CDS
T01293
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cob03016
]
COB47_1471
Enzymes [BR:
cob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COB47_1471
Transfer RNA biogenesis [BR:
cob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COB47_1471
Prokaryotic type
COB47_1471
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADL42760
UniProt:
D9TL78
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All DBs
Position
complement(1586087..1586959)
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AA seq
290 aa
AA seq
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MNGVLLVDKPVGITSHDVVEFVRKVFNVKAGHAGTLDPFATGLLVILIGEATKLSSFFTS
QEKTYIATMQFGIRTDTLDITGKIKEKNMIIVEQKEIEECFKILKGEIELNVPIFSAKKL
NGRKLYEYARKGINIEIPKVKSIIYNIEIISFSYPYLKFKVRCSHGTYIRSLAEKIAENL
STVGLLSELRRIRSGFFDLKDAVTLSDIRAESIIPVCRLFKNEIKVGRKTYKKILNGNPL
VNQDIEDIIDIDTAFADFYKICVDEAVFIYKREKDVFKYVLKVETTDECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttacttgttgacaagccagtgggaattacctcacatgatgttgttgaa
tttgtcagaaaagtgttcaacgtgaaagctgggcatgcaggaacgcttgacccgtttgca
acagggcttttggtcattttgattggggaggctacaaagctttcttctttctttaccagt
caggaaaaaacatatatagcaacaatgcagtttggtataagaaccgacacacttgatata
actggtaaaatcaaagaaaagaatatgataattgttgaacaaaaagagatagaagaatgc
tttaaaattttaaaaggagaaatcgaacttaatgttccaattttttctgccaaaaaactc
aatggtagaaaactctacgagtatgcacgaaaaggaataaatattgaaattccaaaggtg
aagagtatcatatataatatagagataataagcttttcctatccgtatcttaaatttaaa
gttagatgcagccatggaacgtatataagaagtttggcagaaaaaatcgcagaaaatctt
tcgacggtaggtctgctttctgagctaagaaggataagaagcggtttttttgatttgaaa
gatgcagttactttgagcgatatcagggcagaaagtataattcctgtatgtaggttattt
aaaaatgagataaaagtaggtagaaaaacatataagaaaattttaaatgggaatccactc
gtaaaccaggacatagaagatattatagatatagacactgcatttgcagacttttataaa
atttgtgttgatgaggctgtctttatctacaaaagagaaaaggatgtattcaaatatgtt
ttaaaggtggaaactacagatgaatgtttatga
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