Caldicellulosiruptor obsidiansis: COB47_1510
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Entry
COB47_1510 CDS
T01293
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COB47_1510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1510
Enzymes [BR:
cob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
COB47_1510
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
COB47_1510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SHOCT-like_DUF2089-C
FeoB_Cyto
DASH_Dad1
HTH_7
MIT
PBP-Tp47_c
TraK_2
DUF6834_C
bZIP_1
Motif
Other DBs
NCBI-ProteinID:
ADL42798
UniProt:
D9TLB6
LinkDB
All DBs
Position
complement(1623358..1623618)
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AA seq
86 aa
AA seq
DB search
MCELQRDIKFEDAMKRLEEIVKSLEDGNLSLEEAIKLYEEGIRLTKICNDILRSVEKRVV
LIEKLNGEYIQDDITDDIYGGLGQKE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaactacagagagatataaaatttgaagatgcgatgaaaagattagaggagatt
gtaaagagcttggaagatggcaatctttctcttgaagaggctataaagctttatgaagaa
ggaattagactgacaaagatttgcaatgatatactccggagcgtggaaaagagagtagtg
ttaattgaaaaactaaatggagaatatattcaagatgacattaccgatgatatttatgga
ggtttaggtcaaaaagaatga
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