KEGG   Caldicellulosiruptor obsidiansis: COB47_1548
Entry
COB47_1548        CDS       T01293                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cob  Caldicellulosiruptor obsidiansis
Pathway
cob02024  Quorum sensing
cob03060  Protein export
cob03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    COB47_1548
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    COB47_1548
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    COB47_1548
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cob02044]
    COB47_1548
Enzymes [BR:cob01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     COB47_1548
Secretion system [BR:cob02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   COB47_1548
  Eukaryotic Sec-SRP protein
   COB47_1548
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA cobW AAA_17 AAA_30 DO-GTPase1 ParA AAA_33 ABC_tran APS_kinase AAA ResIII BD_b_sandwich EAP30 nSTAND3 Mg_chelatase DUF2855 AAA_5 CA109-like ATP_bind_1 nSTAND_NTPase7 MMR_HSR1
Other DBs
NCBI-ProteinID: ADL42835
UniProt: D9TLF3
LinkDB
Position
complement(1653302..1654633)
AA seq 443 aa
MFSSLSEKLQDVFKKLRGKGKLTEKDIKEAMKEVKLALLEADVNYKVVKDFINTVTQKAV
GEEVLESLTPAQQVIKIVYDEMVNLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKL
AGLLKKQGKNPSLVACDIYRPAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKS
NRSDVVIIDTAGRLHINQELMDELKNIKNAVKPTEILLVVDAMTGQDAVNVAEAFNDQLG
IDGIIMTKLDGDTRGGAALSVKAITGKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVL
TLIEKAQEAIDQKKAEELEKKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGD
VDFDAGEKELKKIEAIINSMTKEERQDPSIINSSRKRRIAMGSGTTVQDVNRLLKQFEDM
KRMMKQFSNPSFAKKGKFKFPFM
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtttagcagtctttctgaaaaattacaggatgtctttaaaaagttgagaggaaagggc
aagctaacagaaaaggatatcaaagaagctatgaaagaggtgaagcttgcccttttagaa
gctgatgtcaactataaggtggtaaaagattttattaacactgtgacacaaaaggctgtg
ggagaagaagttttggaaagcctgactcctgctcagcaggtgataaaaattgtgtacgac
gagatggtaaaccttcttggtggtagtgacactaaacttacattttcaccaagcgggttt
tcaatctatatgatggtaggacttcagggttctggtaagacaactacagctggtaagctt
gcagggcttttgaaaaaacaggggaaaaatccttcgcttgttgcatgtgatatttacaga
cctgctgcaataaagcaattagaagttgttgcacaaaaggttggtgtaaaatgctatgca
gattatacaagtcaagatgctgtcaagatagcaaaagatggcattgagtttgcaaaatca
aacaggtctgatgttgttataatagatacagcaggaagacttcatataaatcaggaactt
atggatgagcttaaaaatatcaaaaatgctgtgaaacccacagaaattttgcttgtagta
gatgctatgacaggtcaagatgctgtgaatgttgcagaagctttcaatgatcaacttggc
atagacggaattattatgacaaagcttgacggtgacacacgaggcggagctgcactttct
gtcaaggcaataactggcaagcctataaagtttgccggtgttggtgagaagatggaagat
ttagaggtttttcatcctgacaggatggcatcaagaatacttggaatgggagatgttttg
acattaatagagaaagctcaggaggcaattgaccagaaaaaggctgaggagcttgaaaaa
aagctcagaagcatgcagtttactcttgaagattttttagatcagctaaagcaaataaag
aagatggggcctttatctcagattatttccatgatacccggcattaaactaaagggtgat
gtggattttgatgctggtgagaaggaacttaagaagatagaagcaatcataaattccatg
acaaaagaagaacgccaagacccaagcattattaattccagcagaaaaagacgaattgcg
atggggtcaggcaccactgttcaagatgtaaacaggcttttgaaacagtttgaagacatg
aaaaggatgatgaagcaattttcaaatcccagctttgccaagaaaggaaaatttaaattt
cctttcatgtaa

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