Caldicellulosiruptor obsidiansis: COB47_1836
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Entry
COB47_1836 CDS
T01293
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1836
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COB47_1836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
DUF7125
AAA
AAA_14
GvpD_P-loop
DUF7129
GvpD_bR2
AAA_5
NTPase_1
AAA_24
nSTAND_NTPase5
ABC_tran
bpMoxR
nSTAND3
RsgA_GTPase
AAA_29
ATPase_2
NACHT
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ADL43112
UniProt:
D9TFZ2
LinkDB
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Position
complement(1976832..1978172)
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AA seq
446 aa
AA seq
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MKIKNIYVCQECGFRTSKWLGRCPNCSSWDTFVLERVDQNKTETISASKENLAVLKLSNL
STKEERFFSGIEELDSVLGGGFVKGELILLGGEPGIGKSTLLLQVANILSGRMKVLYVSG
EEGANQLKLRAQRLGIEGSFDVVCETNFDLIKNIILGLKPEFVIIDSIQTMYVPENQSAP
GSVTQVRDVTMQLLKISKTYNITAVIVGHVTKDGLIAGPRVLEHMVDCVLYFEGERFNTY
RVIRAYKNRFGPTNQLGIFEMTDSGLVEVKNPSSIFLESSYNVEGVAIYSAIEGTRSILL
EIQALTTPTSFGTPRRTVTGIDYNRCVMLCAVLEKKMGFALNVQDIYVNVAGGFKVSEPA
ADLAIVCAIASSYKGLPIGDTVLIGEVGLTGEIRAVSNIEKRLNEAKKLGFKRAIIPKRN
METIQSDGTIEVFGMSNIEEVLNFIF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaacatttatgtttgtcaggagtgtggttttagaacttcaaaatggctt
ggaaggtgtccaaactgttcaagctgggatacctttgtgcttgaaagagtagaccaaaac
aaaacagaaactatttctgcttcaaaagaaaacttagctgttctaaaactttctaacctc
agtacaaaagaagaaaggtttttctctggcatagaagagctggacagtgttcttggcggt
ggatttgtaaagggagagctcattttgcttggcggtgagccgggaattggaaaatcaact
ttgcttttgcaggttgcaaatatattaagtggaagaatgaaggttttgtatgtatcaggc
gaggaaggagcaaaccagctaaaacttagagcacaaaggcttggtattgaaggaagcttt
gatgttgtatgtgaaaccaattttgatttaataaaaaatattatcttgggattaaagcca
gagtttgttataattgattctatacaaaccatgtatgtaccagaaaatcagtcagcgcct
ggaagtgtaacccaagttagagatgttacaatgcagcttttaaaaatctcaaagacttat
aacatcacagctgtaattgtggggcatgtgacaaaagatgggcttattgcaggaccgaga
gttttagaacacatggttgactgtgtattgtattttgaaggagaaagatttaatacatac
agagtgattagagcatacaaaaacaggtttggtcctacaaatcagcttggaatttttgag
atgacggatagtggacttgtcgaggtaaaaaatccttcaagcatttttttggaaagcagt
tacaatgttgagggtgtggctatttattctgcaatagaaggaacaaggtctattctttta
gagatacaagcgcttactactccaacctcttttggcacaccaagaagaacagtgacagga
attgattataatagatgtgtgatgctttgtgctgtgcttgaaaagaaaatgggctttgcg
ttaaatgttcaggatatatatgtaaatgtggctggtggatttaaggtttcagagccggcg
gcagaccttgccattgtgtgcgcaatagcttcaagttataaaggacttcctattggagat
actgtattaataggtgaagtgggtttgacaggcgaaattagagctgtgtcgaatatagaa
aaaagattgaacgaagcaaaaaagctggggtttaaaagggctatcattccaaagagaaat
atggagacaatccaaagtgatggcacaattgaagtctttggaatgtcaaatatagaggaa
gtcttgaattttatattttag
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