Caldicellulosiruptor obsidiansis: COB47_1884
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Entry
COB47_1884 CDS
T01293
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03030
DNA replication
cob03430
Mismatch repair
cob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COB47_1884
03430 Mismatch repair
COB47_1884
03440 Homologous recombination
COB47_1884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cob03032
]
COB47_1884
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1884
Enzymes [BR:
cob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COB47_1884
DNA replication proteins [BR:
cob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COB47_1884
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COB47_1884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_assoc_2
Rad17
AAA_14
AAA_19
TIP49
AAA_18
AAA_2
ORC-CDC6-like
AAA_7
TLN1-like_RS
AAA_24
LysX_preATP_grasp
NPM1-C
RNA_helicase
AAA_28
DUF6547
Mg_chelatase
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
ADL43153
UniProt:
D9TG33
LinkDB
All DBs
Position
complement(2039034..2040638)
Genome browser
AA seq
534 aa
AA seq
DB search
MHIALYRKYRPKVFEDVVAQDHITKTLKNQIKQDKVAHAYIFCGPRGTGKTTTAKIMSRA
VNCLNPKDGNPCNECEVCRSILDEKTLDVLEIDAASNTSVNDVRQIRDEVRYPPSMCKKK
VYIIDEVHMLSTGAFNALLKTIEEPPSHALFILATTDIQKVPATILSRCQRFDFKRISVK
DIYERLKKIVQMENISIDDNALYLISQKAEGALRDALTILERCINTSDEHITYKFVANLL
GVTSTEIVKDFIAAVVENDSNKGLKVVNRLWDEGMDVNTFLEEAVKLLRSALILRLGAKE
VLIDMLEDDKAFVINISNLVDSNRLVSSIKMLIDTANQIRWTRFPKVLLEINTIKLCDSQ
FDTSFETLLERVRKLETKLSQLAENPKAFDAMKLDKAQSTKQEQKTPHIADKSAEGVDTN
ASFSWSEILSRWEEIKEAVKEEKPGLSHVLQSASLKFENGVKVCFKQEDSVFAEVLSRNL
DYFKSVLKRIIEYDGEIFIEVENQKPVQENAVSEKEIINKLKDMFPDTEITVKE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcacatagcactttataggaaatacaggcccaaagtgtttgaagatgttgttgctcag
gatcatataaccaaaacgttaaaaaaccagataaaacaggacaaagtagcacacgcatac
atcttttgcggtccgagaggaactggcaagacaacaaccgcaaagataatgtcaagagct
gtgaactgtttgaatcccaaggatggaaatccatgcaacgaatgtgaggtttgcaggagc
atcttagacgaaaagacacttgacgttttggagattgacgctgcatcaaacaccagtgtc
aatgacgtgaggcaaatcagggacgaagttaggtacccgccttctatgtgcaaaaagaaa
gtgtatataatagacgaggttcacatgctctcaacaggggctttcaacgcgcttttaaaa
accattgaagagcccccctcccatgcactttttattcttgcaaccacagatatccagaaa
gtgcctgcaaccattttatccaggtgtcagaggtttgattttaaaaggatttctgtaaag
gacatatatgaaagactcaaaaagattgttcagatggaaaatatttcaattgacgataat
gccctctatttgatttcgcaaaaggcagaaggagctctgagggatgctttgaccatatta
gaaagatgcataaatacatctgatgaacatataacctacaagtttgttgcaaacctttta
ggtgttacttcaactgagatagtaaaagattttattgctgctgttgtagaaaacgattca
aacaaaggacttaaagttgtaaacaggctctgggatgaagggatggatgtaaataccttt
ttagaagaggctgtgaaacttttgagaagtgcactgattttacgacttggtgcaaaagaa
gttctaattgacatgcttgaggatgataaagcttttgtcataaacatctcaaaccttgtt
gactcaaacaggcttgtgtcgagcataaagatgcttattgacactgccaaccagatacgc
tggacaaggtttccaaaggtcttgcttgaaataaacacaataaagctttgcgatagccag
tttgacacctcatttgaaacactccttgagagagtgcgaaaacttgagacaaagctatca
cagcttgccgaaaatcccaaagcttttgatgccatgaaacttgacaaggctcaatccaca
aaacaagagcaaaagaccccgcatatagctgacaaaagcgcagaaggtgtagataccaat
gcatctttttcatggtctgagattttgagcagatgggaggaaataaaagaggctgtcaag
gaggaaaagccgggactttcacatgttcttcaaagtgccagcctgaagtttgaaaatggt
gtgaaggtatgtttcaagcaggaagatagtgtgtttgcagaggttttaagcagaaattta
gattattttaaatcggttttaaagagaattatagaatatgatggtgagatatttattgaa
gttgaaaaccaaaaacctgtacaagaaaatgctgtgtcagaaaaagagataataaacaag
ctcaaggatatgtttcctgatacagagattactgtaaaagagtga
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