Caldicellulosiruptor obsidiansis: COB47_1896
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Entry
COB47_1896 CDS
T01293
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00300
Lysine biosynthesis
cob00470
D-Amino acid metabolism
cob01100
Metabolic pathways
cob01110
Biosynthesis of secondary metabolites
cob01120
Microbial metabolism in diverse environments
cob01230
Biosynthesis of amino acids
Module
cob_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
COB47_1896
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
COB47_1896
Enzymes [BR:
cob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
COB47_1896
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ADL43164
UniProt:
D9TG44
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All DBs
Position
complement(2049425..2050261)
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AA seq
278 aa
AA seq
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MLFSKMHGLGNDFIVIDARGKEDIDYNLLAKKMCHRHIGVGADGILLVLDSKLADIRMRI
INSDGSEAEMCGNGIRCFSKYVFERGIVKKDKFKVETLAGIIEPQLILNDYGLVEKVRVN
MGKPSFKRKDIPMQGDPESDAINTSIEVEGKEYKITSLLMGVPHTVLFVDDVEKVDIYTL
GPKIEKHEVFPRKTNVNFVQVIDKNNIKVRTWERGAGATFACGTGSCASVIASNLNGFTE
KKVNVHLYFGMLEIEWQDDGTVFMTGPAEEVFVGEYLD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttctaagatgcatggacttggcaatgactttattgtgatagatgcaaggggt
aaagaagatatagattataacttgcttgcaaaaaagatgtgtcatcgccatattggtgtt
ggagcagatgggatattgcttgttttagattcgaagcttgctgatatcaggatgagaatt
ataaactcagacgggtctgaagcagaaatgtgtggtaatggcattcgatgtttttctaag
tatgtatttgaaagaggaatagtgaaaaaagacaaattcaaagttgaaacattggcagga
ataatagaaccacagcttatcttaaacgattatgggcttgttgagaaagtaagggttaac
atgggaaagccaagttttaaaagaaaagacattcctatgcagggtgaccccgagagcgat
gctataaatacctcaatagaggttgaaggcaaagagtataagattacatccctgttgatg
ggggttcctcacacagtgttgtttgttgacgatgtagaaaaggttgacatttatacttta
ggtcctaaaatagaaaagcatgaggtatttccaaggaaaacaaatgtcaattttgttcag
gtgattgacaagaataatattaaggtgagaacgtgggaaagaggagccggagctacattt
gcatgtggaacaggctcttgtgcctctgtgatagcatcaaacttgaacggttttacagaa
aagaaggtaaacgtccacctttattttggcatgcttgaaatagagtggcaagatgatggc
acagtattcatgacaggacctgccgaggaggtttttgttggagagtatttggattaa
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