Caldicellulosiruptor obsidiansis: COB47_2151
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Entry
COB47_2151 CDS
T01293
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
cob
Caldicellulosiruptor obsidiansis
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cob03000
]
COB47_2151
Transcription factors [BR:
cob03000
]
Prokaryotic type
Helix-turn-helix
IclR family
COB47_2151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_11
RPA_C
TrmB
MarR
HTH_23
Fe_dep_repress
HTH_5
Penicillinase_R
HTH_3
RNA_pol_Rpc34
Rrf2
Dimerisation
DnaD_N
LexA_DNA_bind
HTH_20
wHTH-PRTase_assc
HTH_27
HTH_31
HTH_9
Motif
Other DBs
NCBI-ProteinID:
ADL43398
UniProt:
D9TH01
LinkDB
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Position
complement(2317962..2318795)
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AA seq
277 aa
AA seq
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MSQNSVQSIERAFEIIEALAVEPKGLSITQLSQKLSLHKTTVHRILQTLLNRGYVHKDPQ
TLRYKLGVKFVEISSLYLNNIELKTEAHPFLRELVAMLNVTVHLAILDGTDVVYIDKIEQ
VNSIRLYSSIGKRVPAYCTALGKVMLSKLSDEEVEKMLSTISLKPYTQNTITDVEKLMHE
IRFVRNRGFAVDNEELQEGVRCIAAPIYDYRGEMIAAISISAPTSVLPPHKDEEIAQKVV
ETAKKISHRLGYVEDKEDYQGKEMQEDGKGTGTAKDK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaattctgttcagtcaattgaaagggcgtttgagataatcgaagctttggct
gttgagccaaaagggctttcaatcactcagctttcccaaaaactttctcttcacaagacc
actgtccacaggattttgcagacactacttaacagagggtatgttcataaagaccctcag
accctgcgctacaagcttggtgtaaagtttgttgagatttcaagcctttatcttaacaac
attgaactcaaaaccgaagcacatccgtttttgcgtgagcttgtggccatgttaaatgtc
actgtacacctggcaattcttgacggtactgatgttgtatacattgacaagattgaacag
gtaaactcaataaggctttactcctcaattggcaaaagagtccctgcatactgcacagct
cttgggaaagtgatgcttagcaagctttcagatgaagaagttgaaaagatgctatcaaca
atttctctgaaaccatatacacaaaacaccataacggatgtagaaaagcttatgcatgag
ataagatttgttcgaaatagaggctttgcagttgacaatgaagagttgcaagaaggtgtg
aggtgtatcgctgctcctatatatgactatagaggcgagatgattgctgctattagcatt
tcagcaccgaccagtgtactgccacctcacaaagatgaagaaatagcgcaaaaggttgtt
gagactgcaaagaagatttctcacaggcttgggtatgtcgaggataaagaagattatcaa
ggaaaggagatgcaagaggatggaaaaggaacaggtactgcaaaagataaatga
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