Caldicellulosiruptor obsidiansis: COB47_2307
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Entry
COB47_2307 CDS
T01293
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
cob
Caldicellulosiruptor obsidiansis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
SBP_bac_3
PAS_9
PAS
PAS_4
PAS_8
Diguanyl_cycl_sensor
Cas10-Cmr2_palm2
KIAA0319
Ac110_PIF
Motif
Other DBs
NCBI-ProteinID:
ADL43543
UniProt:
D9THR8
LinkDB
All DBs
Position
complement(2502144..2505194)
Genome browser
AA seq
1016 aa
AA seq
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MKNKKYFLFIFTVLWLLVFISPVYAGKTVVKLEVDKNYPPFSYTSDGRIYGFSIDLANIL
FEPDKFDVKLSSDEWHRVYEKLVKGQVDVVVPVAVLEERKDYIYYSKPILTRHVGLYTKK
GFSKNVSLENLKKLKIGVLKSDYTEDILKEKLNVKIYNTYPTVEDLIFALANGKIEAALM
AQEIANYFIIKNNLSDILEIKIKNIYTTQSAFGISKKRPELVSYIDKRLNYLENKGIFDE
LYFNYFSTYSPEYYERKNRETIFSFLFILAIIFFAVSITVLVMIKINKRLEHGKRAYEIY
AQLLADNANAIVLTLNLKGEIIYFNNFAQQLTGYKSEEVVGKKWVDIFIPSHKREYMENL
FKKIAEEKILNNHENEIITKDGEIKWILWNNALIESPYLNEPLIISTGLDITQIKKTQRL
LEESYEEIEQTNEELISALETLNKNSIVLQEEKEKYKFLVENVSDLIFELDINQKKIELY
GKLKDSFDVDIICSTKSLLVWLEYLHEDDRGKVFRKFQDAIFLGDEDVELDFRVKDKCGR
WRWLSIRAHINYDEQKNPEKIVAVCVDWTAKKEYEDRIEHIAYYDTLTGLPNRKLFEEIL
EDWLKKTETEKSTGAVVLIDIDNFKDINDIYGHEAGDEYLKAIGEKVLEYLKKLEVKTFF
ARVGGDEFAVILHGLAKKEQVIEFCAQLLKIFESEIYIESIDRHLFTSASMGVSFYPDDG
KNVKEIFRNVDMALSSAKDNGKNDFQIFMPFILMKNLKKIGIEKNLKKAIEEDQFELYYQ
PVINLKDMEIHSVEALLRWNLPGKGMVSPLEFIPVAEESGLIVKIGEMVIEKAFSDLKNW
ERKGIDYLHMAINLSVRQFKTKFFIDVVKKLIERYSVDPQKISFEITETGAVENFDVSLK
ILSFLCQMGIKFMIDDFGTGYSSLIYLRRLPIGGVKIDKSFISEIESSKESRAIVEGIVL
MAHKIDLKVVAEGVETKKELEVLKEVGCDFAQGYLFSKPLPKTEVEKLLLAKKITV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaaaatatttcctttttatatttacagttttgtggttattggtttttata
tcccctgtatatgccggcaaaactgttgtgaaattggaagtagacaagaactatccacct
ttttcgtatacctcagatggacgtatatatggattttcaattgaccttgctaacattttg
tttgagccagacaaatttgacgtaaaactttcgagcgacgaatggcacagagtttacgaa
aagcttgttaaagggcaagtcgatgtggtagttcctgttgctgtgttggaggaaagaaaa
gattatatatattattcaaaaccaatcttgacacgacatgtaggactttatacaaagaaa
ggtttttcaaaaaatgtttcacttgaaaatctaaaaaaattaaaaataggtgttttaaag
tcagattatacagaagatattttgaaagaaaagttaaatgtaaagatatacaatacatat
ccgacagtggaagatcttatttttgcacttgcaaatggtaaaattgaggctgctttaatg
gctcaagaaatagccaattatttcattataaagaataatctctcagatatcttggaaata
aagataaagaatatatacacaacccaaagtgcatttggtataagtaaaaaacgaccagag
cttgtttcatatatcgataagagattgaattatcttgaaaacaaaggaatatttgacgag
ctttattttaactacttttctacctattcacctgagtactatgagagaaaaaacagagag
acaatattctctttcctgtttattctggcaattatattctttgctgtatcaataacagta
ttggtcatgataaagataaataaaagacttgagcatggaaaaagagcttacgaaatttat
gcccagcttttggctgacaatgcgaacgcaattgttttgacgctaaatttaaaaggagag
ataatttactttaacaattttgcccagcagctaacggggtacaaaagtgaagaggtcgtg
ggcaaaaaatgggtagatatttttataccgtcccacaagcgcgagtatatggaaaatctt
tttaagaaaatagccgaggagaagattttaaataaccatgagaatgagattataacaaaa
gatggcgaaataaagtggattttatggaacaatgctcttatcgaaagtccgtatttgaat
gaaccgttgattatttcaacagggcttgatataacacagataaaaaagacacagcggctt
ttagaagaaagctatgaagagattgaacagacaaatgaagagttaataagcgctttggaa
acattaaataaaaattcaatagtgcttcaggaagagaaagaaaagtataaattcctggtt
gagaatgtatctgaccttatctttgaattggatataaatcaaaagaagatagaactttat
ggtaagctgaaagactcttttgacgttgatataatttgctcaacaaaaagtttacttgta
tggcttgaatatcttcatgaggatgacaggggaaaggtttttagaaaatttcaggatgct
atatttttaggcgatgaggatgttgaactggattttcgtgtaaaagacaaatgtggcaga
tggcgctggctttcgattcgtgcacatataaattatgatgagcaaaaaaatcctgaaaaa
attgttgcagtatgtgttgactggacagcaaaaaaagagtatgaagacagaatagagcat
attgcctactatgatacgctgactggtcttccgaacagaaagctttttgaagaaatttta
gaagactggctcaaaaaaaccgagactgagaagagcacaggtgctgttgttctcatagat
attgacaattttaaggacataaatgatatttacggtcatgaagcaggagatgagtatctg
aaagctataggtgaaaaggttttagaatatcttaagaagttagaggttaaaacatttttt
gcaagagttggcggtgacgaatttgcagtaattttgcacggtcttgctaaaaaagagcag
gtaattgagttttgtgctcagcttcttaagatctttgaaagcgagatttatattgaaagt
atagacagacatctttttacttcagcatcaatgggagtatcattttatccagatgacggt
aaaaacgtcaaagaaatatttagaaatgttgatatggcattatcttctgcaaaagacaat
ggcaagaacgactttcagatttttatgcctttcatacttatgaagaatcttaaaaaaatt
ggaattgaaaaaaatctcaaaaaagccattgaagaagaccagtttgaactttattaccag
ccggttataaacttaaaagacatggagattcattctgttgaagcacttttgagatggaac
ttgccaggaaaaggtatggtatcaccgcttgaatttattcctgttgcagaagagagcgga
cttatagtaaagataggtgaaatggttatagaaaaagctttttcagaccttaaaaattgg
gagagaaaaggaattgactatctacatatggctataaacctctcagttcgacaatttaaa
acaaagttttttatagatgttgttaaaaagctcattgaacgatatagtgttgacccgcaa
aagatttcatttgaaataacagagacaggtgctgttgaaaactttgatgtatcactcaaa
atattgagttttctctgtcagatggggataaagtttatgatagatgattttggaacggga
tattcgtcattgatttatttgagaagacttcctattggtggcgtgaaaatagacaagagt
tttatttcggagattgagagttcaaaagagagtagagcaattgttgaaggcattgttttg
atggcacacaagattgatcttaaagttgtggcagaaggtgttgagactaaaaaagagctt
gaggttttaaaggaagtaggatgtgactttgcacaagggtatctgttttcaaaacccctg
ccaaaaaccgaagttgaaaagcttttattggcaaaaaagattactgtgtaa
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