Cobetia sp. 4B: H2O77_00020
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Entry
H2O77_00020 CDS
T09692
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobb03032
]
H2O77_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_00020 (gyrB)
Enzymes [BR:
cobb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H2O77_00020 (gyrB)
DNA replication proteins [BR:
cobb03032
]
Prokaryotic type
DNA Topoisomerases
H2O77_00020 (gyrB)
DNA repair and recombination proteins [BR:
cobb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2O77_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
QWN36986
LinkDB
All DBs
Position
4019..6436
Genome browser
AA seq
805 aa
AA seq
DB search
MSEQAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGHCSEV
RVVIHADESVSVSDNGRGVPTEIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEELKLTIWRQGNVHEQIYRHGEPQSPLGIVGQTEKTGTLVRFKPSPLTFANI
EFHYEILAKRLRELSFLNSGVAIRLIDERSGKEELFHYEGGLKAFVDHINTNKAPLNPVF
HFEMEREDGIAVEVAMQWNEGFAENIFCYTNNIPQRDGGTHLAGFRAALTRTLNSYIEAE
GLLKKSKVGTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGRLFSEY
LIEKPNEAKGIVNKMLDAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPSLSEL
YLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNPDKLRYHSVIIMTDADVDGSHIRTLLLTFFFRQMPELIERGHIFIAQPPLYKIKRG
KHEQYLKDEQALQDYLTATALDGGKLHVNADAPGIAGAQLEALVNQYRGVMKRIDRLARV
YPSAVLRKIVHAPHLDEAALADQSQVQGWIDGLQKEMDDLIAYEGGPHYSFTLSHDGERN
LYLPAVTLTAHGVSSDYLWDVDFFKSADYREMSELGNMLEGLLEAGSYVSRGERKKEVVT
FYEALDWLMKEAARGFSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVEDAIGADQMFN
TLMGDEVEPRRDFIERFALVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggcttacgactcatcaagcatcaaggtcctcaagggcctggatgccgta
cgcaagcgccccggcatgtatatcggtgataccgatgacggcacggggctgcatcatatg
gtgttcgagctggtggataactccatcgacgaggcgctggccggtcactgtagcgaagtc
cgggtcgttattcatgccgacgagtcagtttccgtcagcgacaacggtcgtggtgtgccg
accgagatccatgaagaggaaggcgtcagcgcagcggaagtcatcatgaccgtgctgcac
gcaggcggtaagttcgatgacaactcctacaaggtctccggcggtctgcacggtgtgggt
gtctcggtcgtcaacgcgctatccgaagagctcaagctgaccatctggcgtcagggcaat
gtccacgagcagatctatcgccatggcgagccgcagtcgccgctgggcatcgtgggccag
accgagaagaccggtaccctggtgcgcttcaagccttccccgctgacctttgccaatatc
gaattccactacgagattctggccaagcgtctgcgcgagctgtccttcctgaactccggt
gtcgccatccgtctgattgacgagcgcagtggcaaggaagagctgttccattacgaaggt
ggcctcaaggcgtttgttgaccatatcaacaccaacaaggcgcccttgaatccggtgttc
catttcgagatggagcgcgaggatggcattgccgtcgaagtggcgatgcagtggaatgaa
ggcttcgccgagaatatcttctgctacaccaacaatattcctcagcgcgatggcgggact
cacctggccggtttccgtgcggcactgacgcgtacgctcaatagctatattgaggcggaa
ggtctgctcaagaaatccaaggtcggtacgaccggggatgatgcccgtgaaggcctgacc
gcgatcatctcggtcaaggtaccggacccgaagttctcctcgcagaccaaggacaagctg
gtctcttccgaggtcaagacagccgtcgagcaggaaatgggccgtctgttctccgagtat
ctgatcgagaagcccaacgaagccaagggcatcgtcaacaagatgctggatgcggcgcgg
gcgcgtgaagccgcacgcaaggcgcgtgatatgacgcgtcgcaagggcgccctggatatc
gcaggtctgccgggcaagctggctgactgtcaggagaaggacccgagtctctccgaactg
tacctggtcgagggtgattccgctggtggctccgccaagcaggggcgtgatcgtcgtacc
caggcgatcctgccgctgaagggcaagatcctcaacgtcgagaaggcgcgcttcgacaag
atgctgtcgtctgccgaggttggcacgctgatcaccgcgctgggttgcggtatcggtcgt
gaagagttcaaccccgacaagctgcgctatcactccgtcatcatcatgacggatgccgac
gtcgatggttcgcacatccgtacgttgctgctgaccttcttcttccgtcagatgccggag
ctgatcgagcgcggtcatatcttcattgcccagccgccgctctacaagatcaagcgtggc
aagcatgagcagtatctgaaggacgagcaggcgctgcaggactatctgaccgccacggcg
ctggacggcggcaagctgcacgtcaacgccgatgccccgggtatcgccggcgctcagctg
gaagcactggtcaaccagtatcgtggcgtgatgaagcgcatcgatcgtctggcgcgcgtc
tacccgtctgccgtgctgcgcaagatagtgcacgctccgcatctggatgaggccgctctc
gcggaccagtctcaggtgcaaggctggatcgacggtctccagaaggaaatggatgacctg
attgcctatgagggcggcccgcactacagtttcactctcagccacgacggcgagcgcaat
ctctatctgccggcggtgacgctgacagcacatggtgtcagcagcgattacctgtgggat
gtcgacttcttcaagtccgccgactaccgcgagatgagtgagctgggcaacatgctggaa
ggcctgctggaagctggcagctacgtctcgcgcggtgagcgcaagaaggaagtcgtcacc
ttctacgaagccctcgactggctgatgaaggaagcggcacgtggcttcagcatccagcgc
tacaaggggctgggtgagatgaacccggatcagctgtgggaaaccaccatggatccggag
tcccgtcgcatgctgcgtgtgaccgtcgaggatgcgatcggtgccgatcagatgttcaac
accctgatgggtgacgaagtcgagccgcgccgtgacttcatcgagcgcttcgcgctggtg
gccaacctcgacgtctga
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