Cobetia sp. 4B: H2O77_00445
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Entry
H2O77_00445 CDS
T09692
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cobb03009
]
H2O77_00445
Enzymes [BR:
cobb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
H2O77_00445
Ribosome biogenesis [BR:
cobb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H2O77_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S9
Motif
Other DBs
NCBI-ProteinID:
QWN37067
LinkDB
All DBs
Position
97965..98729
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AA seq
254 aa
AA seq
DB search
MRLDRWLTRQPQLNRRHALSALAAGRVRVNGATISDPLHEVGPFDDIHLSAPDATICLQI
ARRPRHILLNKPAGVVTACHDPEHPTVIDVLRDTLNARGEDSGWLAEIHHVGRLDRATTG
ALLLTNDGDVSARISDAGLEGPAKLYRMGLERPLTEAEQESAIAQVRQGVLLEHDPRPTL
PAKLAFLTANQARLTLHEGRHHHVKRLWRSLGNRVVWLHRESVAGLSLEGLAPGEWRELT
REECSRLGAAQPRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggaccgctggctgacacgtcagccacagctcaaccgtcgtcatgcgctctcg
gcgctggcggcggggcgcgtgcgggtcaacggcgcgacgatcagtgacccgctgcatgag
gtcggccccttcgatgacatccacctgtcagcgcctgacgcgaccatctgcctgcagatc
gcgcggcgtccgcgtcatatcctgctcaacaagcccgccggggtcgtgacggcctgtcat
gaccccgaacaccccaccgtgatcgatgtgctgcgtgacacgctgaatgcacgcggcgag
gacagcggctggctggccgagatccaccatgtcgggcgtctcgaccgtgcgacgactggt
gccctgctgctgaccaacgacggcgatgtctcggcgcgcatcagcgatgccgggctcgag
ggccccgccaagctttatcgcatggggctggagcggcccctgacggaggccgaacaggaa
agcgccatcgcacaggttcgccagggggtgctgctcgaacatgatccgcgcccgacactg
ccggcaaagcttgcgtttctcaccgcgaaccaggcacgcctgacgctgcacgagggacgc
catcaccacgtcaagcgactgtggcgtagcttgggcaatcgcgtggtgtggctgcaccgt
gagtcggtggcgggcttgagtctcgaggggctggcgccgggggagtggcgcgagcttacc
cgcgaggagtgttcacggctgggggccgcgcagcctcgcgggtga
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