KEGG   Cobetia sp. 4B: H2O77_00550
Entry
H2O77_00550       CDS       T09692                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
cobb  Cobetia sp. 4B
Pathway
cobb00300  Lysine biosynthesis
cobb00470  D-Amino acid metabolism
cobb01100  Metabolic pathways
cobb01110  Biosynthesis of secondary metabolites
cobb01120  Microbial metabolism in diverse environments
cobb01230  Biosynthesis of amino acids
Module
cobb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cobb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    H2O77_00550 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    H2O77_00550 (lysA)
Enzymes [BR:cobb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     H2O77_00550 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: QWN37085
LinkDB
Position
complement(118902..120173)
AA seq 423 aa
MDHFVYQDGVLHAEDVSLATLAEQFGTPCYVYSRATLERHFKAYQDALGDHPHLICYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVIKAGGDPAKVVFSGVAKQAGEMERALELGIK
CFNVESLPELERLNAVADRLGRVAPVSLRINPDVDAGTHPYISTGLKANKFGIPVEQALE
VYEIANAMEHVQVVGADCHIGSQLTELAPFLDSLERLLVLLDRLRERGIVIEHLDLGGGL
GVPYQNETPPEPFAYASALLERLARYEHGSEMTLLFEPGRSIAANAGVLLTRVEYLKPGE
EKNFAIIDAGMNDLIRPSLYQAWQNIVTVDTRETRKSASYDVVGPVCETGDFLGKDRELA
IAPGDLLAVRSSGAYGFVMASSYNSRCRPAEVMVDGPEMHLVRRRERLEELWTGEQLLPE
GDA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggatcacttcgtttatcaggatggcgtgctgcacgccgaagacgtctcgctcgccacg
ctggccgagcagttcggcacgccgtgctacgtctacagccgtgccacgctcgagcgccac
ttcaaggcctatcaggatgcgctgggcgaccacccgcatctcatctgctatgccgtgaag
gccaattccaacctggcggtgctcaatgtgctggcacgtctgggcgccggcttcgacatc
gtctccgccggtgagctggagcgcgtcatcaaggccggcggcgaccccgccaaggtggtg
ttctccggcgtcgccaagcaggccggcgagatggagcgtgcactggagctgggcatcaag
tgcttcaacgtcgagtcgctgccggagcttgaacgcctcaacgccgtcgcggaccgtctc
ggacgcgtcgcaccggtgtcgctgcgcatcaatcccgacgtcgatgccggcactcacccg
tacatctccactggcctcaaggccaacaagttcggcattccggtcgaacaggcgctggag
gtctacgagatcgccaacgccatggagcacgtgcaggtggtcggtgccgattgtcatatc
ggctcccagctgaccgagctggcgcccttcctcgattccctcgaacgcctgctggtcctg
ctggatcgcctgcgtgaacgcggcatcgtcatcgagcacctcgatctcggcggcggcctc
ggcgtgccctaccagaacgagaccccgccggagcccttcgcctacgccagcgccctgctg
gagcgtctggcccgctatgagcacggcagcgagatgacgctgctgttcgaaccgggccgc
tccatcgccgccaacgccggcgtgctgctgacccgtgtcgaatacctcaagcccggtgaa
gagaagaacttcgccatcatcgatgccggcatgaatgacctgatccgtccgtcgctgtac
caggcgtggcagaacatcgtcaccgtcgacacgcgcgagacgcgcaagtccgccagctac
gatgtggtcggcccggtctgcgagaccggtgacttcctcggcaaggaccgcgaactggcc
atcgcgccgggcgacctgctcgccgtgcgctcttccggtgcctacggcttcgtgatggcc
tcgagctacaacagccgctgccgtcctgccgaagtgatggtcgatggccccgagatgcac
ctggtgcgtcgtcgcgagcgcctcgaagaactgtggaccggtgagcaactgctgccggaa
ggtgatgcctga

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