Cobetia sp. 4B: H2O77_00550
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Entry
H2O77_00550 CDS
T09692
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00300
Lysine biosynthesis
cobb00470
D-Amino acid metabolism
cobb01100
Metabolic pathways
cobb01110
Biosynthesis of secondary metabolites
cobb01120
Microbial metabolism in diverse environments
cobb01230
Biosynthesis of amino acids
Module
cobb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H2O77_00550 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H2O77_00550 (lysA)
Enzymes [BR:
cobb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H2O77_00550 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QWN37085
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All DBs
Position
complement(118902..120173)
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AA seq
423 aa
AA seq
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MDHFVYQDGVLHAEDVSLATLAEQFGTPCYVYSRATLERHFKAYQDALGDHPHLICYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVIKAGGDPAKVVFSGVAKQAGEMERALELGIK
CFNVESLPELERLNAVADRLGRVAPVSLRINPDVDAGTHPYISTGLKANKFGIPVEQALE
VYEIANAMEHVQVVGADCHIGSQLTELAPFLDSLERLLVLLDRLRERGIVIEHLDLGGGL
GVPYQNETPPEPFAYASALLERLARYEHGSEMTLLFEPGRSIAANAGVLLTRVEYLKPGE
EKNFAIIDAGMNDLIRPSLYQAWQNIVTVDTRETRKSASYDVVGPVCETGDFLGKDRELA
IAPGDLLAVRSSGAYGFVMASSYNSRCRPAEVMVDGPEMHLVRRRERLEELWTGEQLLPE
GDA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcgtttatcaggatggcgtgctgcacgccgaagacgtctcgctcgccacg
ctggccgagcagttcggcacgccgtgctacgtctacagccgtgccacgctcgagcgccac
ttcaaggcctatcaggatgcgctgggcgaccacccgcatctcatctgctatgccgtgaag
gccaattccaacctggcggtgctcaatgtgctggcacgtctgggcgccggcttcgacatc
gtctccgccggtgagctggagcgcgtcatcaaggccggcggcgaccccgccaaggtggtg
ttctccggcgtcgccaagcaggccggcgagatggagcgtgcactggagctgggcatcaag
tgcttcaacgtcgagtcgctgccggagcttgaacgcctcaacgccgtcgcggaccgtctc
ggacgcgtcgcaccggtgtcgctgcgcatcaatcccgacgtcgatgccggcactcacccg
tacatctccactggcctcaaggccaacaagttcggcattccggtcgaacaggcgctggag
gtctacgagatcgccaacgccatggagcacgtgcaggtggtcggtgccgattgtcatatc
ggctcccagctgaccgagctggcgcccttcctcgattccctcgaacgcctgctggtcctg
ctggatcgcctgcgtgaacgcggcatcgtcatcgagcacctcgatctcggcggcggcctc
ggcgtgccctaccagaacgagaccccgccggagcccttcgcctacgccagcgccctgctg
gagcgtctggcccgctatgagcacggcagcgagatgacgctgctgttcgaaccgggccgc
tccatcgccgccaacgccggcgtgctgctgacccgtgtcgaatacctcaagcccggtgaa
gagaagaacttcgccatcatcgatgccggcatgaatgacctgatccgtccgtcgctgtac
caggcgtggcagaacatcgtcaccgtcgacacgcgcgagacgcgcaagtccgccagctac
gatgtggtcggcccggtctgcgagaccggtgacttcctcggcaaggaccgcgaactggcc
atcgcgccgggcgacctgctcgccgtgcgctcttccggtgcctacggcttcgtgatggcc
tcgagctacaacagccgctgccgtcctgccgaagtgatggtcgatggccccgagatgcac
ctggtgcgtcgtcgcgagcgcctcgaagaactgtggaccggtgagcaactgctgccggaa
ggtgatgcctga
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