KEGG   Cobetia sp. 4B: H2O77_01260
Entry
H2O77_01260       CDS       T09692                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
cobb  Cobetia sp. 4B
Pathway
cobb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cobb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H2O77_01260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:cobb02022]
    H2O77_01260
Two-component system [BR:cobb02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   H2O77_01260
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 HTH_8 AAA_16 AAA_22 Sigma54_activat FleQ NPHP3_N
Other DBs
NCBI-ProteinID: QWN37196
LinkDB
Position
276558..278087
AA seq 509 aa
MTGYTHDSDGFEGAEEFAATGLDPAELRLQQDSDLTREAPVWLVDDDPAVRESLAQWLEL
AEIHLRCFSRAEALLEALAAAEPVSVVISDIRMPGMDGLTLLARLALKAPELPVLMMTGH
GDVATAVAAMQGGARDFIEKPFDPEALELKLRQALAGRRLSDENQRLRRRLSVRGLSGLL
RGESRQIRQLRERLLELRGHPARVWISGEAGSGRSTLALALAEHAPPADAPASSAAMPTA
ATALLARVECAPLSQARTEGAEALAGAIEDALAACPAANTLLLHEVDHLSGAQWHWLDGW
IATREDGARQAPRLVCSALCSVGDVMASGPLTRTLGHALAEIELTTPALRERREDIPLLM
AHFSRQAAEVHEVEAQPFASGELAALMAADWPGNLWQLRQAASRRVVLGELPTARQSSAP
GSASAEEGAGETGNGASDEALASSEEHGLAAQVAMFESTLIRAALTRARGNIAQVLEELA
LPRRTLNLKMHKYGLRREDFRHGHDDSAN
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgacaggctatacgcacgacagcgatggcttcgagggcgcagaggagtttgccgccacg
ggcctggacccggcagagctgcgcctgcaacaggacagcgatctgacccgcgaggcgccg
gtgtggctggtggatgacgacccggcggtgcgcgaatcccttgctcagtggctggagctg
gccgagatccatctgcgctgcttctcgcgcgccgaggcgctgctggaagccctggccgcc
gccgagccggtcagtgtggtaatcagcgacatccgcatgccgggcatggatggcctgacg
ctgctggcgcggcttgcactaaaggcgccggagctgccggtgctgatgatgaccggtcac
ggcgatgtcgccacggccgttgccgcgatgcaaggcggcgcgcgcgacttcatcgagaag
ccgtttgaccccgaagcgctggagctcaagctgcgtcaggcgctggcggggcggcgtctg
agtgatgaaaaccaacgcctgcgccgccgcttgagcgtgcgcggcctcagtggtctgctg
cggggcgagagccgtcagattcgccagctgcgtgagcgactgcttgaattgcgcgggcac
ccggcgcgcgtctggatcagcggcgaggcgggcagcgggcgcagcactctggcgctggca
ctggccgagcatgcgccgcctgccgacgcgccggcctcatctgctgccatgccgacggcg
gcgacggccttgctggcacgagtggaatgcgcgcccctgtcgcaagccaggacagagggc
gcggaggcactggcgggcgcgatcgaggatgcgctcgcggcatgtcctgcggccaatacc
ttgctgctgcatgaggtggaccacctgagtggcgcgcaatggcattggctggacggctgg
atcgccacgcgtgaggacggcgcccgccaggcgccacggctggtgtgcagcgcgctttgc
agcgtgggcgacgtgatggcaagcgggccgctgacgcgtactctcgggcatgcactggcc
gagatcgaactgacgacccccgccctgcgcgagcggcgcgaggacatcccgttgctgatg
gcgcatttcagccgtcaggccgccgaggtgcatgaggtggaggcgcaacccttcgccagc
ggtgagctggccgcattgatggcggcggactggccgggcaatctgtggcagctgcgccag
gccgccagtcgccgtgtggtgctgggggaattgcccaccgcgcggcagtcatccgcaccg
ggcagtgcctcagcggaggagggcgcaggcgagaccggcaatggcgcgagcgacgaggcg
ctggcgagcagcgaggagcatgggctggcggcacaggtggcgatgttcgagtcgaccttg
attcgcgccgccttgacccgcgcacgcggcaacatcgctcaggtgctggaagagctggcg
ctgccgcggcgtacgctcaatctcaagatgcacaaatacgggctgcgccgtgaagacttt
cgccatggccatgatgattcggcgaactga

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