Cobetia sp. 4B: H2O77_02220
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Entry
H2O77_02220 CDS
T09692
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00260
Glycine, serine and threonine metabolism
cobb00460
Cyanoamino acid metabolism
cobb00630
Glyoxylate and dicarboxylate metabolism
cobb00670
One carbon pool by folate
cobb00680
Methane metabolism
cobb01100
Metabolic pathways
cobb01110
Biosynthesis of secondary metabolites
cobb01120
Microbial metabolism in diverse environments
cobb01200
Carbon metabolism
cobb01230
Biosynthesis of amino acids
cobb01240
Biosynthesis of cofactors
cobb04981
Folate transport and metabolism
Module
cobb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H2O77_02220
09102 Energy metabolism
00680 Methane metabolism
H2O77_02220
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H2O77_02220
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
H2O77_02220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H2O77_02220
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
H2O77_02220
Enzymes [BR:
cobb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
H2O77_02220
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QWN37352
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Position
502472..503782
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AA seq
436 aa
AA seq
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MSQQHGYTRDDRLARLDPALAEAILEETARQEAHIELIASENYASPLVMEAQGSQLTNKY
AEGYPGKRYYGGCEFVDKVETLAIERACALFGCDYANVQPHSGAQANAAVFMALVSPGDT
ILGMSLAHGGHLTHGAAPNFSGKHYNAIQYGLTESGELDYEEMERLAREHKPKMIIAGFS
AYSRVVNWRRFRDIADEIGAWLMVDMAHVAGLVAAGHYPSPLPYAHVVTTTTHKTLRGPR
GGLILSATGDEALHKKLNGAVFPGQQGGPLMHVIAAKAAAFKEAMSQDFVSYQARVIANA
RVMAEVFMARGYDVVSGGTDDHLFLVSLIRQGVTGKDADASLGRAHITVNKNSVPNDPQS
PFVTSGLRIGTPAATTRGFGEAECEALAGWICDLLDALATGESAKVEAEVRGKVEEVCAR
FPVYASDSVTDPAALA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaacatggctacacccgtgatgaccgactggccagactcgaccctgcactg
gccgaggccatcctcgaagagacagcgcgtcaggaagcgcatatcgagctgatcgcctcc
gagaactatgcaagcccgctggtgatggaggctcagggcagccagctgaccaacaagtac
gccgaaggctatccgggcaagcgctactacggcggctgcgaattcgtcgacaaggtcgag
acactggccatcgagcgcgcctgtgcgctgttcggctgtgactacgccaacgtgcagccg
cactccggcgcccaggccaacgcggccgtgttcatggcactcgtctcgccgggtgacacc
atcctcggcatgagcctggcgcatggtggtcacctgacccacggcgcggcccccaacttc
tccggcaagcactacaacgccatccagtacggcctgaccgaaagcggcgagctggactac
gaagagatggagcgtctggcgcgtgagcacaagccgaagatgatcatcgccggcttctcc
gcctactcgcgcgtggtcaactggcgtcgcttccgcgatatcgccgacgagatcggcgcc
tggctgatggtcgacatggcccacgtggccggtctggtcgcggcgggtcactacccgagc
ccgctgccctacgcccatgtcgtcaccactaccacccacaagacgctgcgcggcccgcgc
ggtggcctgattctctccgccaccggtgatgaagcgctgcacaagaagctcaatggcgcc
gtcttccccggccagcagggcggcccgctgatgcacgtcatcgccgccaaggccgcggcc
ttcaaggaagcgatgagccaggacttcgtcagctatcaggcccgcgtgatcgccaatgcc
cgtgtgatggccgaggtcttcatggcgcgcggctatgacgtggtctccggcggtaccgat
gaccacctgttcctcgtctcgctgatccgtcagggcgtgaccggcaaggacgcggatgcc
tcactgggccgcgcccacatcaccgtcaacaagaacagcgtgccgaatgacccgcagagc
cccttcgtgacatccgggctgcgcatcggcactccggccgccaccacgcgcggcttcggc
gaggcggaatgcgaggcactggccggctggatctgtgatctgctcgacgcgctggccacc
ggcgagagcgccaaggtggaagccgaggtgcgcggcaaggtcgaggaagtctgtgcccgc
ttcccggtctacgcatcggacagcgtgaccgaccccgccgcgcttgcctga
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