Cobetia sp. 4B: H2O77_02960
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Entry
H2O77_02960 CDS
T09692
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00071
Fatty acid degradation
cobb00280
Valine, leucine and isoleucine degradation
cobb00310
Lysine degradation
cobb00362
Benzoate degradation
cobb00380
Tryptophan metabolism
cobb00410
beta-Alanine metabolism
cobb00640
Propanoate metabolism
cobb00650
Butanoate metabolism
cobb00907
Pinene, camphor and geraniol degradation
cobb00930
Caprolactam degradation
cobb01100
Metabolic pathways
cobb01110
Biosynthesis of secondary metabolites
cobb01120
Microbial metabolism in diverse environments
cobb01200
Carbon metabolism
cobb01212
Fatty acid metabolism
Module
cobb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
H2O77_02960 (fadB)
00650 Butanoate metabolism
H2O77_02960 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
H2O77_02960 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
H2O77_02960 (fadB)
00310 Lysine degradation
H2O77_02960 (fadB)
00380 Tryptophan metabolism
H2O77_02960 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
H2O77_02960 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
H2O77_02960 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
H2O77_02960 (fadB)
00930 Caprolactam degradation
H2O77_02960 (fadB)
Enzymes [BR:
cobb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
H2O77_02960 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
H2O77_02960 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
H2O77_02960 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
H2O77_02960 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
QWN37471
LinkDB
All DBs
Position
704828..706978
Genome browser
AA seq
716 aa
AA seq
DB search
MIYSGKTLTVEANQDAIALLTLDLEGESVNKLASYVLKELGEAVEAIKATADLKGLVIRS
AKEAFVVGADITEFHQMFEKDEAFLIDMNMNIHGIFNAIEDLPFPTVTAINGLALGGGCE
ITLTTDFRVMADSAKIGLPETKLGIIPGWAGCVRLPRLIGADNAIEWICGGTENRADKAL
AVGAVDAVLPVAELDAAALDILARANAGELDYQARRLEKTSPLKLNAIEQMMAFETAKGF
VAGKAGPHYPAPVEAIKVIQKGAGESRERAQAIEAKTFARMALTDVAFNLVGLFMNDQVV
KKKAKGYEKQAGEIKQAAVLGAGIMGGGIAYQSASKGTPILMKDINGEAIELGLKEARKL
FGKGVERGKLTTEKMAQGLSNIRPTLSYGDFGNVDLVVEAVVENPKVKASVLAELEGNVA
EDAILTSNTSTISITRLAESLKRPENFCGMHFFNPVHRMPLVEVIRGEKSSDAAIAATVA
YARQMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANAVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDLGFYRYEEDRKGKP
KKLADDEAQALVAQVVSETREFSDEDIIARMMVPLCMETIRCLEDDIVGSPAEADMALIY
GIGFPPFRGGALRYVDAMGVAEFVALADSLADELGPLYRPTEALRERAKRGEAFYS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggcaaaacgctaaccgtcgaggccaatcaggacgccatcgccctgttg
accctcgatcttgaaggcgaatcggtcaacaagctggccagctacgtactcaaggagctg
ggagaggcggtcgaggccatcaaggcgacggccgatctcaaggggctggtcatccgctcc
gccaaggaagcgttcgtggtcggagccgatatcaccgagttccatcagatgttcgagaag
gatgaagccttcctcatcgacatgaacatgaacatccatggcatcttcaatgccatcgag
gacctgccgttccccaccgtcactgccatcaatgggctggcgctgggcggtggctgcgag
atcaccctgaccaccgatttccgggtcatggccgacagcgccaagatcggcctgccggaa
accaagctcggtatcatccccggctgggcgggctgtgtacgactgccgcgcctgatcggg
gcggacaacgccatcgagtggatctgtggtggcaccgagaaccgtgccgacaaggcgctg
gcagtgggcgccgtcgatgccgtcctgcccgtggccgagctggacgcggcggcactcgat
attctggcgcgtgccaatgccggtgagctggactatcaggcgcgtcgtctcgagaagacc
tcgccgctcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccggcaaggccggtccgcactatccggcgccggtggaggccatcaaggtcatccag
aagggcgcgggggaatcgcgtgagcgtgcccaggccatcgaggccaagaccttcgccagg
atggcgctgaccgacgtggccttcaatctggtcggcctgttcatgaacgatcaggtggtc
aagaagaaggccaagggctacgagaagcaggccggtgagatcaagcaggccgccgtgctg
ggggccggcatcatgggcggcggcatcgcctatcagagcgccagcaagggtacgccgatc
ctgatgaaggacatcaacggcgaggccatcgaactgggcctcaaggaagcacgcaagctg
ttcggcaagggcgtcgagcgcggcaagctgaccaccgagaagatggcgcagggcctgtcc
aacattcgcccgacgctgtcctacggtgacttcggcaatgtggacctggtcgtcgaggcg
gtggtcgagaatcccaaggtcaaggcctcggtgctggccgagctcgagggcaacgtcgcc
gaggacgccatcctgacctccaacacctcgaccatctccatcacgcggctggccgagtcg
ctcaagcgtcccgagaacttctgtggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaagtccagcgatgcggccatcgccgcgaccgtcgcc
tatgcccgccagatgggcaagacgccgatcgtcgtcaacgactgcccgggctttctggtc
aaccgcgtgctgttcccctacttcggtggcttcagcctgctggtcgagaagggcgccgac
tatcagcgcgtcgacaaggtgatggagaagttcggctggccgatgggcccggcctacctg
ctggatgtggtcggcatggataccgcggtgcacgccaatgccgtgatggcggaaggcttc
ccggaccgcatggcgcgagacggcaagaccgccatccaggtgatgtacgacaacaagcgc
ctcggccagaagaatgatctgggcttctaccgctacgaggaagaccgcaagggcaagccg
aagaagctggcggatgatgaagctcaggcactggtggcccaggtcgtcagcgagacgcgc
gagttctccgatgaagatatcatcgcgcgcatgatggtgccgctgtgcatggaaaccatc
cgctgcctggaagacgacatcgtcggcagcccggccgaggccgatatggccttgatctac
ggcatcggtttcccgccgttccgtggtggtgcgctgcgctatgtcgatgccatgggcgtg
gccgagttcgtcgcgctggccgacagcctggccgatgagctggggccgctgtatcgcccg
accgaggcgctgcgcgagcgcgccaagcgtggcgaagccttctactcctga
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