KEGG   Cobetia sp. 4B: H2O77_03430
Entry
H2O77_03430       CDS       T09692                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cobb  Cobetia sp. 4B
Pathway
cobb02020  Two-component system
cobb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cobb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H2O77_03430
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    H2O77_03430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cobb03021]
    H2O77_03430
Transcription machinery [BR:cobb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H2O77_03430
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Serglycin
Other DBs
NCBI-ProteinID: QWN37550
LinkDB
Position
complement(816077..817525)
AA seq 482 aa
MKPTLQLRLGTSLTMTPQLQQAIQLLQLSTLDLRQEIQQALESNPMLELDEDYESLDVVE
TQDSSEISTADSSSEIPEEYPLDSDWSDLYQDHAGSLTSSGSGSGSEEGPDFDRNTSVES
LQDHLRWQLAMTDLDGRESQMAESLIDAVDGAGYLSLSLDELVDGLRGQGLPGLKASELE
QVLLRMQQFDPTGVFARDLRECLLLQLALLPDDLPLLAQARRLVRQFLEALGNDDRKLLK
RRLSLDDDELDHVIRLVRALDPRPASAWGEPASDYVIPDLLVRHTRHGWQVELNPEALPK
LRIQPEYAALIKRADKSADNTFLKDNLQEARWLMKSLSSRNDTLLKVGREIMARQIDFLE
QGEEGMKPLILANIAEVVEMHESTISRVTTQKYIHTPRGVFELKFFFSSQVGGSGSGDAH
SSTAIRARIRKLIAEEPARKPLSDSRLVDLLASDGIEVARRTVAKYREAMGIPSSSERKR
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaacccaccctgcaactccgcctcggcacctcgctgaccatgacgccgcagctccag
caagcgatccagctgctgcagctgtcgacgctcgacctgcgtcaggagattcagcaagcc
ctcgagtccaaccccatgttggagctcgacgaggactacgagtcgctggatgtcgtcgag
acacaggattcgagcgagatctccactgccgactcctcgagcgagattcccgaggaatac
cccctcgacagtgactggtcggacctctaccaggaccacgccggtagcctgaccagctcc
ggcagtggcagcgggagtgaagaagggccggacttcgatcgcaataccagcgtcgagagc
ctgcaggaccacctgcgctggcagctggcgatgaccgacctcgatggccgtgaaagccag
atggcggagagcctgatcgatgccgtcgacggtgccggctatctgagcctgtctctcgat
gagctggtcgatggcctgcgtggccagggcctgcccggcctcaaggcctccgagctcgag
caggtattgctgcgtatgcagcagttcgacccgaccggcgtcttcgcccgtgacctacgc
gaatgcctgctgctacaactggcgctgctgccggatgatctgccgctgctggcgcaggca
cgccgcctggtacgtcaattcctcgaggcactgggcaacgatgatcgcaagctgctcaag
cgccgcctgagccttgacgatgacgagctggaccacgtcatccgcctggtgcgcgcgctc
gatccgcgtccggcatccgcctggggcgagcccgccagcgattacgtgatccctgatctg
ctggtgcgccatacccgccatggctggcaggtcgagctcaacccggaagcgctgcccaag
ctgcgcatccagccggaatacgccgcgctgatcaagcgtgccgacaagtccgccgacaac
acctttctcaaggacaacctgcaggaagcccgctggctgatgaagagcctgtcatcgcgc
aatgacaccctgctcaaggtcggccgcgagatcatggcgcgccagatcgacttcctcgag
caaggcgaggaaggcatgaagccgctgattctggccaacatcgccgaagtggtcgagatg
cacgaatcgaccatctcgcgggtcactacccagaagtacatccacaccccgcgcggcgtc
ttcgagctcaagttcttcttctcgagccaggtcggtggcagcggcagtggcgacgcccac
tcaagcaccgccattcgtgcccgcatccgcaagctgatcgcggaagagccggcccgcaag
cctctctccgactcacggctggtcgatctgctcgccagcgatggcatcgaggtcgcacgc
cgtaccgtggccaagtatcgcgaagcgatgggcatcccctcctccagcgagcgcaagcgt
ctggcctga

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