Cobetia sp. 4B: H2O77_04140
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Entry
H2O77_04140 CDS
T09692
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00550
Peptidoglycan biosynthesis
cobb01100
Metabolic pathways
cobb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H2O77_04140 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2O77_04140 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobb01011
]
H2O77_04140 (mrdA)
Enzymes [BR:
cobb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H2O77_04140 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cobb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H2O77_04140 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QWN37674
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All DBs
Position
975062..977008
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AA seq
648 aa
AA seq
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MRQRRATIKNPQQEVRIFRLRSIVAAGLVLVLAGCLLARLLFLQVVEHDIYTTRSDKNRV
RVEPLPPTRGLIYDRNGQLLAENRPNYNLTIVRERAGDLETTLERLVEILDLPPDEVEDF
KERSRQRQRPYQPALLMSELSQEQIARLAVNRYRLPGVEVEAQLLRYYPDAKPLSHTLGY
VGRINQAELKTLDKGNYSGTHFIGKTGIERFYEEELHGQAGLRKVETNARGRVLRELSRI
DPVPGKDLTLTIDRGLQDLAYRLLKGRRGAIVAIEPKTGDILAMASVPGFNSNEFVTGIS
VKSYRALQNDIDLPLFNRAIRGQYPPASTVKPFMSLAGLENGAITTSTTFYDPGYFQLPN
DSHKYRNWLRWGHGRVNMRRGIAVSNDTFFYNVAYRLGIDRISEYMHKFGFGEQTALDVQ
GALPGLMPSKEWKRNRYDKPWYPGETISIGIGQGYWLATPLQLASAEAVLANRGRHVTPH
LAKRIGDETVLLPRSEEKPDVVLDNPAWWDDVIAALEDVVSGREGTARKYVGPGLKYRMA
GKSGTAQVFTLGQDQKYNGKELAERLRDHALFAAFAPVEHPEIAVSVVIENGQGGSSVAG
PMARAVTDYWLLPRIDPEAREAALTLAAALAPPETPAGEGEQGENDAD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaacgccgggcgacgataaagaatcctcaacaggaagtgcggatctttcgcctt
cgcagcatcgtggctgccggccttgtgctggtgctggccggatgtctgctggcgcggctg
ctcttcctgcaggtcgtggaacacgacatctatacgacgcgctcggacaagaaccgtgtg
cgtgtcgagcccttgccgcccacgcgcggcttgatctatgaccgcaatggtcagctgctc
gccgaaaaccgtcccaactacaatctcaccatcgtgcgcgaacgcgccggtgatctcgag
acgacgcttgagcgcctggtcgagattctcgatctgccgcccgatgaagtcgaagacttc
aaggaacgctcgcgtcagcgtcaacgcccctatcagcccgccctgttgatgagtgaattg
agtcaggagcagatcgcgcgtctggccgtcaatcgctatcgcctgcccggcgtcgaggtc
gaggcgcagctgctgcgctactacccggacgccaagccgctgtcgcataccctgggatac
gtggggcgcatcaatcaggccgagctcaagaccctcgacaagggcaactattcgggcacc
cacttcatcggcaagaccggcatcgagcgcttctatgaagaggagctgcacggtcaggcg
ggcctgcgcaaggtggaaaccaatgcgcggggtcgtgtgctgcgtgagctgtcgcggatc
gacccggtgccgggcaaggacctgacgctgaccatcgaccgcggcctacaggatctcgcc
tatcggctgctcaaggggcggcgtggtgccatcgtggctatcgagcctaagacgggcgac
atcctggcgatggcctccgtgccgggcttcaattccaatgaattcgtcaccggcatcagc
gtcaagagctatcgcgcgctgcagaatgatatcgacctgccgctgttcaatcgtgccatt
cgcggccagtacccgccggcctcgaccgtgaagcccttcatgtcgctggcggggctggag
aacggtgccatcaccaccagcaccaccttctacgatcccggctatttccagctgcccaat
gacagccacaagtatcgcaactggctgcgctgggggcatgggcgcgtcaacatgcggcgt
ggcattgcggtgtccaatgacaccttcttctacaacgtcgcctatcgcctggggatcgac
cgcatcagtgagtacatgcacaagttcggcttcggtgagcagacggcgctggacgtgcag
ggcgcactgcccggcctgatgccgtccaaggaatggaagcgcaatcgctacgacaagccc
tggtaccccggcgagaccatctccatcggtatcggtcagggctactggcttgccacgccg
ttgcagctcgcctcggcggaggccgtgctggccaatcgcggcaggcacgtgacgcctcac
ctggccaagcgcatcggtgacgagacggtattgttgcccagaagcgaggaaaagccggat
gtggtgctggacaatccggcgtggtgggacgatgtcatcgccgcgctcgaggacgtggtc
agcgggcgagaaggcacggcgcgcaagtatgtcgggcccggcctcaagtaccgcatggcc
ggcaagtccggtaccgcgcaggtcttcaccctcgggcaggaccagaaatacaacggcaag
gagctcgcggagcgtctgcgtgaccacgccctgttcgccgcctttgcgccggtcgaacac
ccggagatagccgtctccgtggtgatcgagaacggccagggcggcagctccgtggcgggc
ccgatggcgcgcgccgtcaccgattactggctattgccgcgcattgaccccgaggcgcgt
gaggcggcgctcacgctggctgccgctctggcacccccggagacaccggcgggcgagggt
gagcaaggagagaacgatgccgactga
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