Cobetia sp. 4B: H2O77_04565
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Entry
H2O77_04565 CDS
T09692
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H2O77_04565 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_04565 (xthA)
Enzymes [BR:
cobb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H2O77_04565 (xthA)
DNA repair and recombination proteins [BR:
cobb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H2O77_04565 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QWN37748
LinkDB
All DBs
Position
complement(1073475..1074287)
Genome browser
AA seq
270 aa
AA seq
DB search
MRLISFNINGIRARPHQLEALIETHQPEVIGLQETKVQDSEFPHAHIEALGYHVVWHGQK
GHYGVAMLTRQVPKKVHYGMPDDDEDAQKRMIGVEIDGPNGEPLIVYNGYFPQGENIEHP
VKFPYKTRFYQQLFRLLEEDHQPEQHVVVMGDYNISATDRDIGIGEPNRKRWLREGKTSF
QPIEREWMERLYAWGLTDSFRHVHPEVDDQFSWFDYRSRGFEREPRRGLRIDLIMTSPGL
TPLIKDSGVDYALRGMEKPSDHAPVWTDIG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgatttccttcaacatcaacggcatccgtgcgcgtccgcatcagctggaagcg
ctgatcgagacgcatcagccggaagtcattggcctgcaggaaaccaaggtgcaggacagt
gaattcccccacgcgcacatcgaggcgctgggctatcacgtggtgtggcacggccagaag
ggccactacggcgtcgcgatgctgacccgccaggtgccgaagaaggtgcactacggcatg
ccggatgacgacgaggatgcccagaagcgcatgatcggcgtcgagatcgatggcccgaac
ggcgagccgctgatcgtctacaacggctacttcccccagggcgagaatatcgagcacccg
gtgaagttcccctacaagacacgcttttatcagcagctgttccgcctgctggaagaagac
caccagcccgagcagcatgtagtggtgatgggcgactacaacatctcggccaccgaccgc
gacatcggcatcggcgagcccaaccgcaagcgctggctgcgcgaaggcaagaccagcttc
cagcccatcgagcgcgagtggatggagcgcctctacgcctggggcctgaccgacagcttc
cgccacgtgcacccggaagtcgatgaccagttcagctggttcgactaccgctcacgcggc
ttcgagcgtgagcccaggcgcggtctgcgcatcgacctgatcatgaccagccccggcctg
actccgctgatcaaggattccggtgtcgactacgcgctgcgcggcatggaaaagccgtcg
gatcacgccccggtgtggaccgatatcggctga
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