KEGG   Cobetia sp. 4B: H2O77_05080
Entry
H2O77_05080       CDS       T09692                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
cobb  Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:cobb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cobb03016]
    H2O77_05080 (truA)
Enzymes [BR:cobb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     H2O77_05080 (truA)
Transfer RNA biogenesis [BR:cobb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    H2O77_05080 (truA)
 Prokaryotic type
    H2O77_05080 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: QWN37837
LinkDB
Position
1199410..1200501
AA seq 363 aa
MPFFTPLDDNEKRPGRIALGVEYDGTRYCGWQRLSHAPSVQEALEKALSKVASTPITVHC
SGRTDSGVHAMRQVVHFDTPVGRSRKAWRMGGNVNLPPDIGIHWAVPVPDDFHARFSAIA
RRYRYMIINQPFRPVMERNNVTWCREPLNVADMQAAAAHLVGELDFSAFRAAGCQSRSPR
RHVHFIEVSRHGHIVMIDIQANAFLHHMVRNIAGTLMAIGRGEKPVEWIVELMRGGDRTR
SSATAAATGLHFVDVIYPPRYALPKEPLGPGLVAHLGEWTGERPLPDCPMVRSRMARAEA
EGAEEARAAGKLSEQEAIRLANVAREAERLSREHEQAIPAAGVPAAGAEDDTLTAATQNE
SSR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcccttttttacaccgttggatgataacgagaaacgcccggggcgcattgctctgggc
gttgaatatgatggcacccgctattgtggctggcagcgtctgagccacgccccctccgtg
caggaagcgctcgagaaggccttgtccaaggtcgcctccacgccgattaccgtgcattgc
agtggccgcaccgattccggtgtgcatgccatgcgtcaggtcgtgcatttcgataccccc
gtgggccgcagtcgcaaggcctggcgcatgggcggtaacgtcaaccttccccccgatatc
gggattcattgggccgtgccggtgcccgatgatttccatgcgcgtttcagcgccatcgcc
cgccgctatcgctacatgatcatcaaccagccgtttcggccggtaatggagcgcaacaat
gtcacctggtgtcgtgagccgctcaatgtcgccgacatgcaggccgcggcggcgcatctg
gtgggcgagctggatttctcggcgttccgcgccgcaggctgtcagtcgcgctcgccgcgc
cgccacgtgcacttcattgaagtcagtcgccatggccatatcgtcatgatcgatatccag
gccaatgccttcctgcatcacatggtgcgcaatatcgcgggcaccttgatggccatcggg
cgtggcgagaagcctgtcgagtggatcgtcgagctgatgcgcggaggagatcgcacacgc
tcgagcgcgacggcagcggcgacagggcttcacttcgtcgatgtcatctatccgccgcgc
tatgcgctgcccaaggaacccctgggccctggtctggtcgcacatcttggcgagtggacg
ggcgagcgcccgttgccggactgcccgatggtgcgctcacgcatggcgcgtgccgaggcc
gagggtgccgaagaggcgcgcgcggcgggcaagctcagtgagcaggaggccatccggctg
gccaatgtagcccgtgaggccgagcgcctcagccgtgagcatgaacaagcgattcctgcg
gcaggcgttcctgcggcaggcgccgaggatgacacgctgacggctgccacccagaatgaa
tcctcacgttga

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