Cobetia sp. 4B: H2O77_06715
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Entry
H2O77_06715 CDS
T09692
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobb03000
]
H2O77_06715
Transcription factors [BR:
cobb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H2O77_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
PRP4
Herpes_ICP4_N
Motif
Other DBs
NCBI-ProteinID:
QWN38125
LinkDB
All DBs
Position
complement(1562451..1563479)
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AA seq
342 aa
AA seq
DB search
MHEDVSRTGDSDATWQNKGFEHAPGKCTREAWDVNEQAHNITEWSQHYDQYGHGAFYGRI
DELHLPGMQVFKEYTSQALDQQCHVWPDSLWIGIPSEHQPCRINGYALEAGDIMCQPGGQ
DFALTTPDSFAIHSLVLRRDWLLEIVGESALSLLEGDPQRSMRLGMPQGTRQAVTFLMDR
LIKRQETGFEVQVHQDILSLAVAAILEKRTPLTDRYPSYHHRRQVVERVREHVNSTEPAP
VCIESLCRIAHVSQRTLRNSFTSILGISPMQFIRLNRLNQVRRRLCDSQSTSTVGQVASD
WGFYHLGQFARDYRRLFGESPSSTLARYRRKAPAPEVHFSAR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagatgtatcacggacgggcgacagtgatgccacctggcagaacaaggggttc
gagcatgcaccaggcaagtgcacacgggaggcttgggacgtcaatgaacaggcgcataac
atcaccgaatggtcacaacattatgatcaatatggtcatggcgccttctatgggcgcatt
gatgagcttcatctaccgggaatgcaggtattcaaggaatacaccagccaggcactggac
cagcaatgtcatgtctggccggattcactgtggattggtattccaagcgagcaccagccc
tgtcggatcaatggctacgcgcttgaggcaggcgacatcatgtgtcagccaggcgggcag
gatttcgcgctgacgacacccgatagcttcgcgatccactctctcgtattacggcgtgac
tggctgctcgagatcgtgggagagtcggctctctcgctgctggaaggggatccgcagcgc
tcgatgcgcctcggcatgccgcaaggaactcggcaagccgtcaccttcctgatggaccgc
ctgattaagcgtcaggaaacaggattcgaggtgcaagtccaccaggacattctgtcgctg
gctgtcgccgccattctggagaaaaggactcccctgaccgaccgctacccaagctatcat
caccgacggcaggtagtggagcgggtacgagaacatgtgaacagcacggaacctgcaccg
gtctgtatcgaaagcctctgccgtatcgctcatgtcagtcagcggacgcttcgcaacagc
ttcaccagcattctcggcatcagccccatgcaattcatccgcctcaaccgactcaatcag
gtacgacggcggctgtgcgactctcagtcaacgagcacggtcggtcaggtcgccagcgac
tgggggttctatcatctgggccagttcgcccgggattatcgtcgcctctttggtgagagc
ccctcgagcactctggcgcgctatcgacgcaaggctccagcacccgaagttcacttttcc
gcgagatag
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