Cobetia sp. 4B: H2O77_08480
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Entry
H2O77_08480 CDS
T09692
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00450
Selenocompound metabolism
cobb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
H2O77_08480 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobb03016
]
H2O77_08480 (selD)
Enzymes [BR:
cobb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
H2O77_08480 (selD)
Transfer RNA biogenesis [BR:
cobb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
H2O77_08480 (selD)
Prokaryotic type
H2O77_08480 (selD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
AIRS
AIRS_C
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
QWN38429
LinkDB
All DBs
Position
complement(1993025..1995409)
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AA seq
794 aa
AA seq
DB search
MPVKAPIVRDIVLIGGGHSHVGVLMRFAMQPEPGVRLTVICRDTDTPYSGMLPGYVAGHY
TFDDVHIDLRRLCQFAGARFYRDQVIDIDRRERRVICAERPAVDYDLLSINIGSTPRLSH
IDGIGDPEAADAPVVAVKPISTFQQRWLSLLERARSAERPLDIVLVGGGAGGVELLLAIQ
QRLATELPDALAPNLALITRGQRLLPTHAHTVSEALATTLHERGIQVHFGEEITAVERAS
STAQRQLISASGACHQADEAIWVTRAGGARWLEKTGLSLDEDGFLKVRDSLQTLEDDAIF
AAGDIAHQLNHPREKAGVFAVRQARPLADNLRRAVRGEPLKDHVPQSRWLALISTGDRDA
IASRGNLGLVAPRLRPWLWRWKDHIDRQFMARFNELPSMQDAANTGGLAGVHQRISAAWQ
ALKGSDGKLHPRLTAELDEQEAHQALSALAMRCGGCGAKVGASVLSRALQSLAPRENPDV
LVGLHAPDDAAIVRVPEGQALVHSVDFFRAFIDDPYLFGRIAANHALGDLYAMGATPHTA
TAVATVPQGVERKVEPLVRELMQGATEVLNGAGCSLVGGHTGEGQELALGFALNGLVEES
LAGVTCKGGMQPGDVLLLTKAIGTGTLLAAHARLEARGRWIDAALDSMQQSSQRAADILR
AHQASASTDVTGFGLLGHLVEMTRASGVDAELEIDALPVLDGAEDCVARGVVSSLQPANL
RLKRALKDQAGVIDHPRYPLLFDPQTAGGLLASVPPGEAEPCLAALKAAGYHASAIIGRI
TPQGDALAPISIKR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcaaagcgcctatcgtgcgtgatatcgtcctgatcggcggtgggcacagccac
gtcggcgtgctgatgcgctttgccatgcagccagagcccggtgtccgcctgaccgtcatc
tgtcgcgacaccgacacgccctattccggcatgttgccgggctacgtcgccggtcattat
acgttcgatgatgtgcatatcgacctgcgccggctgtgtcagttcgccggtgcccgcttc
tatcgcgatcaggttatcgatatcgaccgccgcgagcgccgcgtgatctgcgccgagcgc
ccagcggtggactacgacctgctgtcgatcaacatcggttccacgcctcgcctgtcccac
atcgacggtatcggtgaccctgaagccgcagacgcccctgtggtggcggtcaagccgatc
agcaccttccagcagcgctggctgagtctgctcgagcgcgccaggagcgccgagcgtccg
ctcgatatcgtgctggtcggcggcggtgccggcggggtcgaactgctgctggccatccag
cagcgcctcgccaccgagttgcccgatgcgctcgcgccgaacctggcgctgatcacccgc
ggacagcgcctgttgcccacccatgcgcacacggtcagcgaggcacttgccactaccctg
cacgagcgcggtatccaggtgcatttcggtgaggagatcacggccgtcgaacgcgcatcc
tcgaccgcccagcgccagctgatcagtgctagcggtgcctgccaccaggccgatgaggcc
atctgggtgacacgggccggtggcgcgcgctggctggagaagaccggactgagcctggac
gaggatggcttcctcaaggtgcgcgatagcctgcagacgcttgaggatgacgccatcttc
gccgcgggcgatatcgcgcatcagctcaaccatccccgcgagaaggccggtgtgtttgcc
gtgcgtcaggcgcggccgctggccgacaatctgcgacgggccgtgcgcggcgagccactc
aaggaccatgtgccgcagtcgcgctggctggcgctgatcagcaccggggatcgcgacgcc
atcgcctcacgcggcaacctggggctggtcgcgccgcgtctgcgcccgtggctgtggcgc
tggaaggaccatatcgatcgccagttcatggctcgcttcaatgaactgcccagcatgcag
gacgccgcgaataccggcggccttgctggggtgcatcagcgtatcagcgctgcctggcag
gcgctcaagggcagcgatggcaagctgcatccgcgcctgaccgccgagctggatgagcag
gaggcgcatcaggccctgtccgcactggcgatgcgctgcggcggctgcggggccaaggtc
ggcgccagcgtgctgtcgcgagcgctgcagagtctggccccgcgcgagaacccggacgtg
ctggtcgggctgcatgccccggatgatgccgccatcgtgcgcgtgcccgaaggacaggcg
ctggtgcacagcgtcgacttcttccgcgccttcatcgatgacccctacctgttcgggcgc
atcgccgccaatcacgcgctgggcgatctctacgccatgggcgcgacgccgcacacggcg
acggcggtggccacggtgccacagggggtagagcgcaaggtcgaaccgctggtgcgcgag
ctgatgcaaggcgcgaccgaggtgctcaacggggcaggctgcagtctggtcggcggccac
accggcgaaggtcaggagctggcgctgggcttcgcgctcaatggtctggtggaggagagt
ctggccggcgtcacctgcaagggcggcatgcagccgggcgatgtgctgctgctcaccaag
gccatcggcaccggcacgctgttggcggcgcacgcacgcctggaagcccgcggccgctgg
atcgacgccgcgctggacagcatgcagcaatccagtcagcgcgcggcggatattctgcgc
gcgcatcaggcgagcgcctccaccgatgtcaccggcttcggtctgctcggccatctggtc
gagatgacccgcgccagcggcgtggatgccgagctcgagatcgatgccctgccagtgctc
gacggcgctgaggactgtgtcgcccgcggcgtggtcagctcgctgcaaccggccaatctg
cgcctcaagcgtgccctgaaggaccaggccggcgtcatcgatcatccgcgttatccgctg
ctgttcgatccgcagaccgccggtggcctgctggccagtgtgccgcccggggaagccgag
ccctgtctggccgcgctcaaggccgccggctatcacgccagcgccatcatcgggcgcatc
acgccccagggcgatgcactggcgccgatcagcatcaagcgctga
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