Cobetia sp. 4B: H2O77_09235
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Entry
H2O77_09235 CDS
T09692
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
cobb
Cobetia sp. 4B
Pathway
cobb02020
Two-component system
cobb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H2O77_09235
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H2O77_09235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobb03021
]
H2O77_09235
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cobb02035
]
H2O77_09235
Transcription machinery [BR:
cobb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H2O77_09235
Bacterial motility proteins [BR:
cobb02035
]
Flagellar system
Flagellar assembly proteins
Stator
H2O77_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
QWN35525
LinkDB
All DBs
Position
complement(2202954..2203712)
Genome browser
AA seq
252 aa
AA seq
DB search
MYTANGRMAQQDIYTEYQPLVRRIALQLQVRLPASVDLEDLIQAGMLGLCECVGRYEQGH
GASFATYASQRIRGAMLDELRSRDWLPRSVRRAGRELESVIQQLEQSLGYPPEETQIAAA
MGLELEDYRRLLLDTNNGMVMSLDEMMDEEGGLAGGYVSPEATPFATPFALPHDALEEAD
TRRALNEAIARLPEREKLLMALYYQEKLNLKEIGAVLDVTESRVSQLHSQAVRRLQGVLA
PHLVARAGKRRR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgccaatgggcgcatggcccagcaggatatctacaccgagtatcagccgctg
gtgcgccgcatcgcgctgcagctgcaggtgcgcttgccagcgagtgtcgatctcgaggat
ctgattcaggctggcatgttggggctgtgtgaatgcgtgggccgctatgagcagggccac
ggcgccagctttgccacctatgccagtcagcgcatccgcggcgcgatgctggatgagctg
cgctcgcgcgactggttgccgcgcagtgtgcgccgggccggtcgcgagcttgagagcgtg
atccagcagcttgagcagagcctgggctatccgcccgaggagacccagatcgccgctgcc
atggggcttgagctggaagattaccgacgcctgctgctggacaccaacaacggcatggtg
atgtcgctggacgagatgatggatgaggaaggcgggctggcgggtggttatgtctcgcct
gaagcgacgcccttcgccacaccgtttgccttgccgcatgatgcgctggaagaggccgat
acgcggcgggccttgaacgaggccatcgcgcggctgccggagcgcgagaagctgttgatg
gcgctctattatcaggagaagctcaacctcaaggagatcggcgcggtactcgatgtcacc
gaatcgcgtgtctcgcagctgcattcccaggccgtgcgccggctgcagggtgtgctggca
ccgcatctggtggcacgggcgggcaagcgtcgtcgctga
DBGET
integrated database retrieval system
