Cobetia sp. 4B: H2O77_10260
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Entry
H2O77_10260 CDS
T09692
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
cobb
Cobetia sp. 4B
Pathway
cobb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H2O77_10260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobb02000
]
H2O77_10260
Transporters [BR:
cobb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
H2O77_10260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
nSTAND1
RsgA_GTPase
AAA
AAA_16
AAA_22
AAA_29
TOBE_2
AAA_25
AAA_28
NACHT
ORC-CDC6-like
nSTAND3
nSTAND_NTPase5
AAA_18
ATPase_2
Rad17
AAA_23
AAA_5
NB-ARC
TsaE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QWN35706
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Position
2460954..2462141
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AA seq
395 aa
AA seq
DB search
MLAIDTATTFDSQSAGGLLTSALRERAADQHYLKLNGLAKSFGKTQVFAEIEAEIARGEF
ITLLGPSGCGKSTLLRAIAGLNDVDAGQIIVDGHDITSLPPQRRGIGMVFQHYALFPNMR
VADNVAFGLRMKKVRPEERERRVSEVLRLVELTDQAQRFPHQLSGGQRQRVALARALVVE
PQILLLDEPLSALDARIRRHLRDQIRDIQKSLGLTTLFVTHDQEEALLLSDRIFLMHQGR
ILQQGNAESLYTRPVDATAAGFMGHYNLIGRELARPLLGYESDSPRVALRPEALYLQPDT
SPQGQQDEHANFPTQPLPDNAGPGCPGVIRRHQLLGNIVRYEVDCQGLRLNVDVLNRSAR
QLLPRHLRVMLHADLDEVQALGGHETTATSQVSHG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccatcgacaccgccaccactttcgatagccagagcgccggcggccttctgacc
agtgccctgcgcgaacgcgccgccgaccagcactacctcaagctcaatggcctggccaag
agcttcggcaagacccaggtattcgccgagatagaggccgagatcgcgcggggtgaattc
atcaccctgctcgggccctccggctgcggcaagtcgaccctgctgcgcgccatcgccggc
ctcaatgatgtcgatgcaggccagatcatcgtcgatggtcacgacatcacgtcgctgccg
ccgcagcgtcgcggcatcggcatggtcttccagcactatgcgctgttccccaacatgcgg
gtggcggacaacgtggccttcgggctgcgcatgaagaaggtgcgcccggaagagcgcgag
cggcgtgtcagcgaggtgctcagactggtggagctgaccgatcaggcgcagcgtttcccg
caccagttgtccggcggtcagcgtcagcgtgtggcactggcacgcgcgctggtggtcgag
ccgcagatcctgttgctggatgagccgctgtcggcactcgatgcacgtatccgccgccat
ctgcgtgatcagatccgcgatatccagaagagcctcggcctgaccaccctgttcgtgacc
cacgatcaggaggaggcgctgctgctgtcggaccgcatcttcctgatgcatcaggggcgc
atcctgcaacagggcaatgccgagtcgctgtatacccggccggtggatgccacggcggcg
ggcttcatggggcattacaacctgatcggtcgcgagctggcgcgcccgctgctcggctac
gagagtgacagcccgcgcgtggcactgcgtccggaagcgctgtatctgcaaccggacacc
agcccccagggacaacaggatgaacatgccaacttcccgacccagcccttgccggacaat
gccggccccggctgcccgggcgtgattcgccgccaccagctgctcggcaatatcgtgcgc
tacgaggtggactgtcagggactgcgcctgaatgtcgatgtcctcaatcgcagcgctcgg
cagttattgccgcgccatctgcgcgtgatgctgcacgccgatctggatgaggttcaggcg
ctgggcgggcacgagaccaccgccacgtcgcaggtgtcccatggatga
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