Cobetia sp. 4B: H2O77_13300
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Entry
H2O77_13300 CDS
T09692
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
cobb
Cobetia sp. 4B
Pathway
cobb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H2O77_13300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobb02000
]
H2O77_13300
Transporters [BR:
cobb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H2O77_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
QWN36223
LinkDB
All DBs
Position
complement(3223559..3224641)
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AA seq
360 aa
AA seq
DB search
MPRSTISSLTTTSPLTTAAPARVTLKALALSTAVAATLIATPSWAAEYEWTFQTSETAGE
PQFEVKKAWADSIKTMSDGRIAIEILPVNAVVQANQTLDAVSAGILQGHLTDPSYFSGQN
PAFGMLGNLVGAWGDPLEYLEYMQHGGGEELYNELVEPYGVHLIGAGATGLESFVSKKPV
RTVDDLKGLKVRAPEGMVYNIFQKAGAAPVNLPGSEVYTGLEKGVIDAADYTVFATNDDQ
GLHSFAKYPSYPGFHSLPMVAVSMNKGIWDGLPADLKAIMETATDAMAYDMVFTLKARDI
KAVSAARANPDIEVIDMAPEERAKFRRIAQQEWKVWAEKNELTGKVYESVVSFLTDRNLM
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttccactatctcgtcgctcaccactacctcgccgctcaccactgccgctccc
gcccgtgtcacgctcaaggcgctggccctgtccaccgccgtggccgccacgctgatcgcc
acaccgagctgggccgccgagtacgaatggaccttccagacctccgagacggccggggag
ccgcagttcgaggtcaagaaggcctgggccgacagcatcaagaccatgtcggatggccgc
atcgccatcgagatcctgccggtcaatgccgtggtgcaggccaaccagacgctggacgcc
gtcagcgccggcatcctgcagggccatctgaccgatccttcctacttctcgggccagaat
ccggccttcggcatgctgggcaacctggtgggcgcctggggtgacccgctggaatatctc
gagtacatgcagcacggcggcggtgaggagctctacaacgagctggtcgagccctacggc
gtgcacctgatcggcgcgggcgccaccgggcttgagtccttcgtctccaagaagccggta
cgcaccgtcgatgacctcaagggcctcaaggtgcgtgccccggaaggcatggtctacaac
atcttccagaaggccggcgcggcgcccgtcaacctgccgggctccgaggtctacaccggt
ctggagaagggcgtgatcgacgcggcggattacaccgtcttcgccaccaatgatgaccag
ggcctgcacagtttcgccaagtacccgtcctacccgggcttccactccttgccgatggtg
gcggtatcgatgaacaagggcatctgggacggcctgccggcggatctcaaggcgatcatg
gagaccgctaccgacgcgatggcctacgacatggtcttcaccctcaaggcgcgtgacatc
aaggcggtgagcgcggcgcgtgccaatccggatatcgaggtgatcgacatggcaccggaa
gagcgcgccaagttccgtcgcatcgcgcagcaggagtggaaggtgtgggccgagaagaat
gagctgaccggcaaggtctacgagtccgtggtcagcttcctgaccgaccgcaacctgatg
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