Cobetia sp. 4B: H2O77_13405
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Entry
H2O77_13405 CDS
T09692
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobb03021
]
H2O77_13405 (rpoS)
Transcription machinery [BR:
cobb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H2O77_13405 (rpoS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QWN36243
LinkDB
All DBs
Position
complement(3247699..3248676)
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AA seq
325 aa
AA seq
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MSMLEKDIDQAEVELSLEDVEEDDDTLEAEAEEAAFERALNREERKHYQSLDATQIYLNE
IGFSPLLKPEEEVYFGRLAQAGDPAGRQRMIESNLRLVVKIARRYLNRGLSLLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARQ
LTQKLDHEATAEEIADFLDKPVDTVKKMLGLNERVSSVDYPMGGESDKPLIETIADENDT
SPESSLVDVDVKAHVDEWLAELTEKQMEVVVRRFGLRGHEAATLEEVGEEIGLTRERVRQ
IQVEALKKLRRMLEKQGLTLESIFE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgctggaaaaggatatcgatcaggctgaggttgagttgtcccttgaggatgtc
gaggaggacgacgatacgcttgaggcagaagcggaagaggcggcattcgaacgcgccttg
aatcgtgaagagcgcaagcactaccaaagcctggatgcgacccagatctacctcaacgag
attggtttttccccgttgctcaagcccgaggaggaagtctacttcgggcgtctggcacag
gcgggcgaccccgccggtcgccagcgcatgatcgagtccaacctgcgtctggtggtcaag
atcgcgcggcgttatctgaatcgtggtctgtcgctgctcgacctgatcgaggagggcaat
ctggggctgatccgcgcggtggagaaattcgaccccgagcgcggcttccgtttctcgacc
tacgccacctggtggattcgccagaccatcgagcgggcactgatgaatcagacgcgcacc
attcgtctgccgattcacgtcgtcaaggaactcaacatctacctgcgtgccgcgcgccag
ctgacccagaaactggatcacgaggccaccgcggaggagatcgccgacttcctcgacaag
ccggtcgataccgtcaagaagatgctggggctcaatgagcgcgtgtcatccgtcgactac
ccgatgggcggcgagagcgacaagccgttgatcgagaccatcgccgacgagaatgacacc
agcccggagtccagcctggtggatgtcgacgtcaaggcgcatgtcgatgagtggctggcg
gaactgaccgagaagcagatggaagtggtggtgcgccgcttcgggctgcgcggtcatgaa
gctgcgacgctggaggaagtgggcgaggagatcggcctgacgcgtgagcgggtgcgtcag
attcaggtcgaggcgctcaagaagctgcggcgcatgctcgagaagcaggggctgacgctc
gaatccatctttgaatga
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