Cobetia sp. 4B: H2O77_14140
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Entry
H2O77_14140 CDS
T09692
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb03030
DNA replication
cobb03430
Mismatch repair
cobb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H2O77_14140 (dnaX)
03430 Mismatch repair
H2O77_14140 (dnaX)
03440 Homologous recombination
H2O77_14140 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobb03032
]
H2O77_14140 (dnaX)
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_14140 (dnaX)
Enzymes [BR:
cobb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H2O77_14140 (dnaX)
DNA replication proteins [BR:
cobb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H2O77_14140 (dnaX)
DNA repair and recombination proteins [BR:
cobb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H2O77_14140 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_18
AAA_16
AAA_2
AAA_30
AAA_19
TsaE
Mg_chelatase
nSTAND3
AAA_28
PIF1
AAA_24
ABC_tran
Rad17
Motif
Other DBs
NCBI-ProteinID:
QWN36371
LinkDB
All DBs
Position
complement(3423070..3425292)
Genome browser
AA seq
740 aa
AA seq
DB search
MSYQVLARKWRPRNFHELIGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCEEGVSSRPCGVCGTCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFTLKNMPP
VRVVEHLSDILAREEVSFEEDALWLLGKAADGSMRDAMSLTDQAIAFGHGQVRREDVAAM
LGTLDHRHVLALLECLASLDAASLLAEVATLAEQGPDYGGVLDDMASVFHRLAIAQMVPS
ALDNGHGDRDALLALASRFTGEDVQLYYQIALQGRGDMANAPDARTALEMTLLRMLAFRP
QGVPRPAQTPLPMTGQAEGANAPGAQASAPVQQAPVQQAPVQAAPAQQAPVQQAPAQPQQ
APVPPMAPAPQPAAPVAAPATEAQPPMADEPPPWATEDVPQDARDAGFRDVAQDAPQPAA
APVSAPAPEQTAAPAQAPAAPSSAMSRLSAAFGSAPAQPEAAESSAPQPAEALPATLEPA
EPVPAAPQPAEAVPAAPAQPEPAASPAPEPAVSEPVANEPVVAAQPIPEPAPAAAPTPAP
SAPSTDGRLNHAAWLELFPSLGLGGITRNIGAHCLVEHDDGTHLKLRLDPAQSAMMAEVH
QDRIRKALAGQGVERVLEISVAPLPEGLETPHSRRIRLLGERHVRAVEALRADPHIQSME
QQLGARLIEESVNSFEPDDF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtattggcgcgcaagtggcgcccgcgcaattttcacgaactgatcggt
caggagcatgtcagccgtgcgctggtcaatgccctcgatcaggggcgcctgcaccatgcc
tatctgttcaccgggacccgcggtgtcggcaagacgacgctggcgcgcattctggccaag
tgcctgaactgtgaagagggcgtcagctccaggccgtgtggcgtgtgtggcacctgtcgc
gagatcgatgagggccgcttcgtcgacctgatcgaagtcgacgccgcctcgcggaccaag
gtcgaggacacgcgtgagctgctggacaacgtccagtacgcgccgacccagggccgctac
aaggtgtacctcatcgatgaggtgcacatgctgtcgacccacagtttcaatgcgctgctc
aagaccctggaagagccgccgccccatgtgaagttcctgctcgcgaccactgatccgcag
aagctgccggtcaccatcctgtcgcgctgcctgcagttcacgctcaagaacatgccgccg
gtgcgcgtggtcgagcacctgtctgacattctcgcccgcgaggaagtcagcttcgaggaa
gacgcgctgtggctgctcggcaaggccgccgatggttcgatgcgtgacgccatgagtctg
accgatcaggcgatcgccttcggccatggccaggtgcggcgcgaagatgtcgccgccatg
ctcggcacgctggatcaccgccatgtgctggcgctgctggagtgtctggcctcgctggac
gccgcgagtctgctggcggaggtcgcgaccctggccgagcaggggccggactacggcggg
gtgctggatgacatggcgtccgtcttccaccgtctggcgatcgcccagatggtgccgagc
gcactggacaacgggcatggcgaccgtgatgcgttgctggcgctggccagccgtttcacc
ggtgaagacgtgcagctctattaccagatcgcccttcaggggcgtggcgacatggccaac
gccccggatgcgcgtaccgcactggaaatgacgctgctgcgcatgctggccttccgcccg
cagggcgtgccgcgcccagcgcagacgccgctgccgatgaccggccaggcggagggtgcg
aacgcgcctggcgctcaagcctcggcgcctgtccagcaagcgcctgttcagcaggctcct
gttcaagcagctccggctcagcaggctcctgtccagcaagccccggcccagcctcagcaa
gcgccggtgcccccgatggcgcccgcgcctcagcctgccgcaccagtggccgcgccagcg
accgaagcacagccgccgatggccgacgagccgcccccgtgggcgacggaggacgttccg
caggacgcccgggatgccggctttcgcgacgtagcgcaagacgcgccccagcctgcggcc
gcgccagtgtcggcgccagcgccagaacagacggcagctcccgcacaggcgcccgctgcg
ccaagctcggcgatgtcacgcctgagtgccgccttcggttccgcgccggcacagccagag
gctgctgagtcatcggctcctcagcccgctgaagcattaccagcaacgctagagcccgct
gaacctgtaccagcagcgccgcagcccgctgaagctgtaccagcagcgccagcacagccc
gaacccgctgcatcgccggcgccagagccggccgtgtctgagccggtcgcaaacgagccg
gtcgtggcagcgcaaccgataccggagccggcacccgcggctgctcccacgccggcgccg
agcgccccgagtaccgatggtcgcttgaatcacgccgcgtggctggagctgttcccttca
ctggggctgggcggcatcacgcgcaatatcggcgcgcattgcctggtcgagcacgatgac
ggcacccacctcaagttgaggctggaccccgcccagtcggcgatgatggccgaagtccat
caggatcgcattcgcaaggcgctggcgggccagggcgtggagcgtgtgctggagatcagc
gtcgcgccgctgccggaaggtctggaaacgccgcacagtcgtcgcattcgtctgctgggt
gaacgtcatgtgcgcgcggttgaagccttgcgtgctgacccgcatatccagtccatggag
caacagctgggcgcacgtctgatcgaggaaagcgtcaactccttcgagccggacgatttc
tga
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