Cobetia sp. 4B: H2O77_14410
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Entry
H2O77_14410 CDS
T09692
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobb03016
]
H2O77_14410 (trmA)
Enzymes [BR:
cobb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
H2O77_14410 (trmA)
Transfer RNA biogenesis [BR:
cobb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
H2O77_14410 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_15
Methyltransf_12
Methyltransf_31
Methyltransf_4
TRM5-TYW2_MTfase
RrnaAD
DREV
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QWN36407
LinkDB
All DBs
Position
complement(3494955..3496085)
Genome browser
AA seq
376 aa
AA seq
DB search
MAIAVVDPSQYEQQLAEKAEQTRARFAVFDAPELEVFPSPPSHYRMRCEFRIWHEDDDLY
YAMFEVEFDDEGNKKKTVVRMDDFPVASQRINELMPLLRERLKASPVLRERLFQCEFLTT
LSGEALVTLIYHRKLGEDWEAEARALEEELDIMIIGRSRKQHIVLTRDHVFERLEVDGRE
YVYQQVENSFTQPNAEICRSMLSWARDVTHPDKAQAEGREQGDLVELYCGNGNFTIALAE
NFRRVLATEISRTSVASAQVNLAANSIDNAQVARMSAEDFSLALAGEKAGRRVAEMDLDN
HDFRTVLVDPPRAGLDADSCEQTARYERIVYISCNPQTLIDNLEVLCRTHRIERFALFDQ
FPYTDHLECGVYLVRR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgccgtcgtcgatcccagtcagtatgaacagcagctcgccgagaaggccgag
cagacccgcgcacgtttcgctgtcttcgatgcgccggaactggaggtatttccctcgccg
cccagccattaccgcatgcgttgcgagttccgtatctggcacgaggatgatgacctctat
tacgcgatgttcgaggtcgagttcgacgacgagggcaacaagaagaagacggtcgtgcgc
atggacgacttccctgtcgccagccagcgcatcaatgaattgatgccgctgctgcgtgag
cgcctcaaggcaagcccggtgctgcgcgagcgtctgttccagtgcgagttcctcaccacc
ctgagcggcgaggcactggtcacgctgatctaccatcgcaagctcggcgaagactgggaa
gccgaggcacgtgcgctggaagaagagctcgacatcatgatcatcgggcgttcgcgcaag
cagcatatcgtgctgacgcgcgaccacgtcttcgagcgtctcgaggtcgatggccgcgag
tacgtctatcagcaggtcgagaacagcttcacccagcccaatgccgagatctgccgctcg
atgctcagctgggcacgtgacgtgacccatcctgacaaggcgcaggcggaaggccgtgag
cagggcgatctggtcgagctctactgcggcaacggcaacttcaccatcgcgctggccgag
aacttccgccgcgtgctggccaccgagatctcgcgcacttccgtggcctcggcgcaggtc
aacctggcggccaatagcatcgacaatgcccaggtggcgcgcatgtcggccgaggacttc
tcgctggcgctggcgggcgagaaggcgggccgtcgtgtcgcggagatggacctcgacaac
cacgacttccgcaccgtgctggtcgatccgccgcgtgccggcctcgatgccgacagctgc
gagcagaccgcgcgctacgagcgcatcgtctatatctcctgcaacccgcagacgctgatc
gacaaccttgaggtactgtgccgcacgcaccgtatcgaacgcttcgcgctgttcgatcag
ttcccgtataccgaccacctcgaatgcggtgtctatctggttcgcagataa
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