Cobetia sp. 4B: H2O77_14470
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Entry
H2O77_14470 CDS
T09692
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobb03000
]
H2O77_14470
Transcription factors [BR:
cobb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
H2O77_14470
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_23
MarR_2
HTH_10
HNH_repeat
HTH_IclR
HTH_3
Sigma70_r4
Sigma70_r4_2
HTH_31
TetR_N
Sigma54_DBD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QWN36418
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All DBs
Position
3507757..3508794
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AA seq
345 aa
AA seq
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MPSQPHKASRLKRVTLADIAARLGVTKVTVSRALNQPEKVSAAMRERVTECARELGYMPN
RQAGSLASGHSRLIALLIPSLSNAVFSELHRGLEAPLAAAGYQLLIGHTGYSMQEEERLI
ETWLSFGIDGLVLCGSRHSPRTREMIARSGCAVVECMEKRETPLDMAVGLDQHAAGRAMT
EAMIDLGHRHIGFLGARMDRRVEQRLGGWRAAMEAAGLSQQALLTTDAPSSVRMGGELLD
EMLTRWPETQAVFCCNDDLAAGGLFECQRRGLSVPDQLALAGFNGLEMTRGTWPPLASVV
TPRREIGERAAALLLARLSGDLDATPHGLWEDLGFSLQTGGSLAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcagccacacaaagcttcccgcctcaagcgcgtcaccctggccgatatcgcc
gcccgactgggcgtcaccaaggtcacggtgtcgcgcgcgctcaatcagcccgagaaggtg
tccgccgcgatgcgcgagcgggtaaccgaatgcgcccgcgagctgggttacatgcccaac
cgccaggccggcagcctcgccagcggtcactcgcggctgatcgcgctgctgattccttcg
ctctccaacgccgtgttctcggagctgcatcgtggcctggaagccccactggccgccgcg
ggctatcaactgctgatcggccataccggctattcgatgcaggaagaggagcgcctgatc
gagacctggctctccttcggcatcgatgggctggttctgtgcggcagtcgccatagccct
cgtacccgcgagatgatcgcgcgctcgggctgtgcggtggtggagtgcatggagaagcgc
gagacgccgctcgacatggcggtaggactggaccagcacgccgctggccgtgcgatgacc
gaggccatgatcgacctggggcatcgccatatcggctttctcggcgcgcgcatggaccgc
cgcgtcgaacagcgcctgggtggctggcgcgcggcgatggaggccgccggcctgtcgcag
caggcgctgttgaccaccgatgccccctccagcgtgcgcatgggcggcgagctgctcgac
gagatgctgacccgctggcccgagacccaggccgtgttctgctgcaatgacgacctggcg
gccggcgggctgttcgagtgtcagcgccgcggcctgtcggtgcccgaccagctggcactg
gccggcttcaacggcctggagatgacccgcggcacctggccgccgctggccagcgtggtc
acgccacgccgcgagatcggcgagcgcgccgccgccctgctgctggcgcgcttgagcggt
gatctcgacgccacgccccacggcctgtgggaagatctgggcttcagcctgcagacaggc
ggtagtctggcaccgtga
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