Cobetia sp. 4B: H2O77_15030
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Entry
H2O77_15030 CDS
T09692
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb03030
DNA replication
cobb03430
Mismatch repair
cobb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H2O77_15030
03430 Mismatch repair
H2O77_15030
03440 Homologous recombination
H2O77_15030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobb03032
]
H2O77_15030
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_15030
Enzymes [BR:
cobb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H2O77_15030
DNA replication proteins [BR:
cobb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H2O77_15030
DNA repair and recombination proteins [BR:
cobb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H2O77_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QWN36517
LinkDB
All DBs
Position
complement(3671333..3671977)
Genome browser
AA seq
214 aa
AA seq
DB search
MFEQLRRASDRRRHAQGEFAELFRPWHAAERGGERVALDCETTSLDVGHAELVSLAAVRF
DARHIHTSSALSLYLQCPQGLQGDSIRIHRLRGIDLHGGEALGDALRQLLEFIGNRPLVG
WCIDFDVAVINRHLRPRFGFDLPNQRHDLARDYVRRCKHEQPDAAPDLRFEAMADALGVP
VIGRHSALGDAVTSALMAQRLMQAPLSPSLASQA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaactgagacgcgccagtgatcgtcgtcgtcatgcgcagggcgagtttgcc
gagctctttcgtccctggcatgccgccgagcggggcggggagcgtgtggcgctggactgc
gagaccaccagtctcgatgtcggccacgccgagctggtctcgctggcggcggtgcgtttc
gatgcgcgccatatccatacctccagcgcgctgtcgctctatctgcaatgcccgcaaggg
ctgcagggcgactcgatccgcatccatcgtctgcgcggtatcgatctgcatggcggagaa
gcgctgggcgatgcgctgcgacagctgctggagttcatcggcaatcgtccgctggtgggc
tggtgcatcgacttcgatgtcgcggtgatcaaccgtcacctgcggccacgcttcggcttt
gatctgcccaaccagcgtcatgatctggcgcgcgattacgtccggcgctgcaagcatgag
cagccggacgccgccccggacctgcgcttcgaggcgatggcagatgccctgggcgtgccg
gtgatcggtcgccacagcgcgctgggggacgccgtgaccagtgcgctgatggcgcagcgc
ttgatgcaggcaccgctgtcgccctcgctggccagtcaggcctga
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