Cobetia sp. 4B: H2O77_16195
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Entry
H2O77_16195 CDS
T09692
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H2O77_16195 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cobb01007
]
H2O77_16195 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobb03016
]
H2O77_16195 (lysS)
Enzymes [BR:
cobb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
H2O77_16195 (lysS)
Amino acid related enzymes [BR:
cobb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H2O77_16195 (lysS)
Transfer RNA biogenesis [BR:
cobb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H2O77_16195 (lysS)
Prokaryotic type
Other AARSs
H2O77_16195 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QWN36712
LinkDB
All DBs
Position
complement(3958037..3959575)
Genome browser
AA seq
512 aa
AA seq
DB search
MSTEQTPAIDEQQAAEQAQEENRLIAERRAKLNARREQAAAEGKSAFPNDFRRDSLAADL
MEELGEKDKAELETLDRKAAVAGRIMRKRGPFIVLQEVSGQIQLYVDKKGLPEALLEDIK
SWDIGDIVGASGPVHKSGKGDLYVMIESAQLMTKNLRPLPDKFHGLSDQEMRYRQRYVDL
IMNEQSRRTFALRAGIVASIRRFLSERGFMEVETPMLQQIPGGATARPFITHHNALDMEM
YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYRDLIALT
EDMIRTAAQEVLGTTQITCQGSEYDLSQPFIQMTMRESIIKYGDGITEADLADYDAARAT
AERLGIQVKPIWGLGKLETEIFEEVAEHRLDQPTFITEYPAEVSPLARRNDANPHVTDRF
EFFVGGREIANGFSELNDAEDQAERFQAQVAEKDAGDDEAMFYDADYVRALEYGMPPTAG
EGIGIDRLVMLLTDSASIRDVLLFPAMRPQQG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagagcagacccccgccattgatgagcagcaggccgccgaacaggctcaggaa
gagaaccgcctgatcgccgaacgtcgcgccaagctgaacgcccgccgcgagcaggccgcc
gccgaaggcaagagtgcctttccgaatgatttccgtcgcgacagcctcgccgctgacctg
atggaagagctgggcgagaaggacaaggccgagctggagacgctggaccgcaaggccgcc
gtcgccgggcgtatcatgcgcaaacgtggccccttcatcgtgctgcaggaagtctccggc
cagattcagctctacgtcgacaagaagggtctgccggaagcgctgctcgaggacatcaag
agctgggatatcggtgacatcgtcggtgccagtggtccggtgcacaaatccggcaagggt
gatctgtacgtcatgatcgaaagcgcccagctgatgaccaagaacctgcgtccgctgccg
gacaagttccacggtctgtccgatcaggaaatgcgctatcgccagcgttatgtcgacctg
atcatgaacgagcagtcacgccgcaccttcgcgctgcgtgccggcatcgtcgcctccatc
cgtcgcttcctcagcgagcgcggcttcatggaagtcgagacgccgatgctgcagcagatt
ccgggtggcgcgaccgcacgtccgttcatcacgcaccacaatgcgctggacatggaaatg
tacctgcgcatcgcgccggagctgtacctcaagcgtctggtggtgggtggcttcgagcgc
gtgttcgagatcaaccgcaacttccgcaacgaagggctgtcgacgcgtcacaaccccgag
ttcaccatgctcgagttctactgggcctacgcggactaccgtgacctgatcgcgctcacc
gaagacatgatccgcaccgcggctcaggaagtgctcggcaccacgcagatcacctgtcag
ggcagcgagtacgacctgagccagccgttcatccagatgaccatgcgtgagtcgatcatc
aagtacggcgatggcatcaccgaagccgacctggccgattacgacgccgcgcgcgccacg
gccgagcgtctcggtatccaggtcaagccgatctggggtctgggcaagctcgagaccgag
atcttcgaggaagtcgccgagcaccgtctcgaccagccgaccttcatcaccgaatatccg
gccgaagtcagcccgctggcgcgtcgcaacgatgccaacccgcacgtgaccgatcgcttc
gagttcttcgtcggtggccgcgagatcgccaatggcttctcggagctcaacgacgccgaa
gaccaggccgaacgcttccaggcccaggtggccgagaaggacgccggtgatgacgaagcc
atgttctacgacgccgactacgtgcgcgcgctggaatacggcatgccgccgaccgccggt
gaaggcatcggcatcgatcgtctggtgatgctgctgaccgacagcgcctccatccgcgac
gtgctgctgttcccggccatgcgtccgcagcagggctga
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