KEGG   Cobetia sp. 4B: H2O77_16295
Entry
H2O77_16295       CDS       T09692                                 
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
cobb  Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:cobb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cobb03036]
    H2O77_16295 (xerD)
Chromosome and associated proteins [BR:cobb03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    H2O77_16295 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_M Phage_int_SAM_4 DUF3435
Other DBs
NCBI-ProteinID: QWN38905
LinkDB
Position
complement(3987241..3988146)
AA seq 301 aa
MDDDALVEAFLDTLWLERGASDNTLGAYRSDLTAWRRWLADQAETGADAVPLLSVAPQQV
QDFCDSRRESHALRSTARLLSALRRFYRWALAEGMIEADPLHEVRLPRVIPSLPGTLDEE
EVERLLEAPDLDTPIGLRDRTMLEVLYGAGLRISELVNLSVDALNLRQGVVRVTGKGDRE
RLVPLGEEACDWLSRWLSVGRPAMMADQTRPALFPGRHDKAMTRQTFWHRIRRHAVTAAI
SKPLSPHTLRHAFATHLLNHGANLRVVQLLLGHRDLSTTQIYTHVAQARLERLHAEHHPR
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atggacgacgatgcgttggtcgaggcctttctcgatacgttgtggctagagcggggtgcc
agtgacaatacgctcggcgcctatcgcagtgatctcacggcctggcggcgctggttggcc
gatcaggcggagacgggtgctgacgcggtgccgttgctgagcgtggcaccgcagcaggtg
caggacttctgtgactcgcggcgtgagtcgcatgcgctgcgctccacggcacgtctgctg
tcggcgctgcggcgcttctatcgctgggcgctggccgaaggcatgatcgaggcggacccg
ctgcatgaggtgcgcctgccgcgcgtgattcccagcctgccgggcacgctggatgaggag
gaggtcgagcgcctgctggaggcgccggatctcgacacgcccatcgggctgcgcgaccgc
accatgctcgaagtgctctatggcgcggggttgcgtatcagcgagctggtcaacctgagt
gtcgatgcgctcaatctgcgccagggcgtcgtgcgtgtcaccggcaagggcgatcgtgag
cggctggtgccgctgggcgaggaggcctgtgactggttgtcacgctggctgtccgttggc
cgacctgcgatgatggccgaccagacgcgtccggcactgtttcccggccgacacgacaag
gccatgacgcgacagaccttctggcatcgcatccggcgtcacgccgtgactgcggccatc
agcaagcctctgtcaccgcatacgctgcgccatgccttcgccacgcacctgctcaatcac
ggtgccaacctgcgtgtcgtgcagttgttgctggggcatcgtgatctttccacgacccag
atctatacccatgtggcccaggcgcgtctggagcgtctgcatgccgaacatcatccgcgt
ggctga

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