Cobetia sp. 4B: H2O77_16775
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Entry
H2O77_16775 CDS
T09692
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cobb
Cobetia sp. 4B
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_16775 (phrB)
Enzymes [BR:
cobb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H2O77_16775 (phrB)
DNA repair and recombination proteins [BR:
cobb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H2O77_16775 (phrB)
Prokaryotic type
H2O77_16775 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QWN36804
LinkDB
All DBs
Position
4093694..4095190
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AA seq
498 aa
AA seq
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MSSDSPSASSPASAPAGAPLQLVWLRSDLRVHDNTALSQAAARGPAVAVVAPCLAQWVEH
GHGANKLDFLRRGLHVLQQALAGYHIPLKVLDCDTFAEVPEALAALCNELGAQALHFNDE
YAVNERERDRRVRERLAESDVRLHRYTDMLAFTPGELLTGKGDYYGVFTPFSKRWHKEVD
TRRLALNEAPEVQATPRDAQGREIQGDAIPPLPETLKGKPATALDAELWPAGEEAAQERL
ERFLTFRARRYHEQRDIPATRGTSELSPYLALGMISARQCYAAVLAENGSLADGDVGLTS
WVNELIWREFYQHILVGFPRVNRHRPFQRHTEALQWRDDETGFAAWCEGRTGYPIVDAAM
RQLVQTGWMHNRLRMVTAMFLTKHLLIDWRRGEAFFMTHLVDGELGANNGGWQWAASTGT
DAAPYFRIFNPTTQGQRFDKGGEFIASMVPELAELPAKRRHQPSADDCQQTGYPRPIVDH
KAARQRALDTFKALSKSE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgactcaccatccgcctcttcccccgcctccgcgccagcgggggctcccctg
cagctggtctggctgcgcagtgacctgcgcgtacacgacaacactgctctctcgcaggcc
gccgcacgcggcccggccgtggccgtcgtcgccccctgcctggcgcagtgggtcgagcac
ggccacggtgccaacaagctcgacttcctgcgccgcggcctgcatgtcctgcaacaggca
ctcgccggctatcacatcccgctcaaggtgctcgactgcgacaccttcgccgaggtgccc
gaggcgctggccgcgctgtgcaacgagctgggtgcccaggccctgcacttcaacgacgaa
tatgccgtcaatgagcgtgaacgcgacaggcgcgtgcgtgagcgccttgccgagagcgac
gtccgcctgcatcgctacaccgacatgctggccttcacgcccggcgagctgctgaccggc
aagggcgattactacggcgtcttcacgcccttctccaagcgctggcacaaggaagtcgat
acccgtcgtctggcgctgaatgaggcacctgaagtgcaagccacgccccgtgacgcccag
gggcgcgagatccagggcgacgccatcccgccactgcccgagacgctcaagggcaagccg
gcgacagcgctggacgccgagctatggccggccggcgaagaggccgcgcaggagcgcctg
gagcgcttcctgaccttccgagcgcgccgctaccacgagcagcgcgatatccccgccacc
cgtggtaccagcgagctatcgccctatctggcgctgggcatgatctcagcccgccaatgc
tacgccgccgtactggcagagaacggcagcctcgccgatggcgatgtcggcctgaccagc
tgggtcaacgagctgatctggcgtgagttctatcagcacatcctggtcggtttcccgcgc
gtcaatcgccaccgtcccttccagcgccacaccgaagccctgcagtggcgcgacgatgag
acaggcttcgccgcctggtgcgagggccgtaccggctaccccatcgtcgatgccgccatg
cgtcagctggtgcagaccggctggatgcacaatcgcctgcgcatggtgacggcgatgttc
ctcaccaagcatctgctgatcgactggcggcgtggcgaggccttcttcatgacccatctc
gtcgatggtgagctgggcgccaacaatggtggctggcaatgggcggcttccaccggcacc
gatgccgcgccctatttccgcatcttcaatccaaccacccagggccagcgcttcgacaag
ggcggcgagttcatcgcgagcatggtgccggaactggccgagctgcccgccaagcggcgc
caccagcccagtgcggatgactgccaacagacgggctatccacgaccgatcgtcgatcac
aaggccgcccgccagcgggcgctggataccttcaaggcgctgtcaaaaagcgaatga
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