Cobetia sp. 4B: H2O77_16840
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Entry
H2O77_16840 CDS
T09692
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
cobb
Cobetia sp. 4B
Pathway
cobb03030
DNA replication
cobb03430
Mismatch repair
cobb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H2O77_16840 (ssb)
03430 Mismatch repair
H2O77_16840 (ssb)
03440 Homologous recombination
H2O77_16840 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobb03032
]
H2O77_16840 (ssb)
03400 DNA repair and recombination proteins [BR:
cobb03400
]
H2O77_16840 (ssb)
03029 Mitochondrial biogenesis [BR:
cobb03029
]
H2O77_16840 (ssb)
DNA replication proteins [BR:
cobb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H2O77_16840 (ssb)
DNA repair and recombination proteins [BR:
cobb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
H2O77_16840 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
H2O77_16840 (ssb)
Mitochondrial biogenesis [BR:
cobb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
H2O77_16840 (ssb)
BRITE hierarchy
Motif
Pfam:
SSB
Pro-rich
tRNA_anti-codon
DNApol_Exo
Lyase_8_N
Motif
Other DBs
NCBI-ProteinID:
QWN36816
LinkDB
All DBs
Position
complement(4109557..4110213)
Genome browser
AA seq
218 aa
AA seq
DB search
MARGVNKVILIGNLGQDPEVRFTPSGSAVCNLNLATTDTWNDRQSGQRQERTEWHRVVMF
NKLAEVAQQYVKKGSRLYIEGRLQTRKWQDQNGNDRYSTEIVANDMQMLDTRGEGGGGNF
AGGRPQQAPQQGGQQPAAAPQQGGQFGGQQPAPQQGGQFGGQQPAPQQGGQFGGQQPAPQ
QGNNFGGQQPAQQNNSQNNNFGAPPAGSFDDFDDEIPF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtggcgtaaacaaggtcattctgatcggtaatctcggtcaagacccggaagtt
cgcttcaccccgtccggtagtgcggtgtgcaacctgaacctcgcgacgacggacacctgg
aatgatcgccagagcggtcagcgtcaggaacgtaccgaatggcaccgtgtggtgatgttc
aacaagctggctgaagtggcccagcaatacgtcaagaaaggctcacgcctgtatatcgaa
ggccgcctgcagacgcgcaagtggcaggatcagaacggcaatgaccgttacagcacagaa
atcgtggccaacgacatgcagatgctggatacgcgtggtgaaggtggcggcggcaacttc
gctggtggtcgcccgcagcaggcgcctcagcagggcggccagcaaccggccgcagccccc
cagcagggtggccagttcggtggtcagcagccggccccgcagcaaggtggccagttcggt
ggtcagcagccggcccctcagcaaggcggtcagttcggtggtcagcagccggcacctcag
cagggcaacaacttcggtggccagcagcctgcccagcagaacaactcccagaacaacaat
ttcggtgcgccgcccgcgggcagcttcgatgatttcgatgatgaaatcccgttctga
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integrated database retrieval system
