Cobetia sp. cqz5-12: F8A90_00310
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Entry
F8A90_00310 CDS
T10568
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc02020
Two-component system
cobc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F8A90_00310
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
F8A90_00310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cobc02035
]
F8A90_00310
Bacterial motility proteins [BR:
cobc02035
]
Flagellar system
Chemotaxis proteins
MCPs
F8A90_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
Spectrin_SYNE1
CoV_S2
Toxofilin-like_dom
Motif
Other DBs
NCBI-ProteinID:
QQK62774
LinkDB
All DBs
Position
69048..71105
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AA seq
685 aa
AA seq
DB search
MMTPVHRMPACLATEGRPTRSALVPPVPFPMDSNQGVAMFASLRARITLACVAIVLVALV
VVSSLNAWTTFRNTHADESDYQQQVLRSNAAQLSQWFSVHINAVSGIAASSLESFPDAAL
TQAMKQGDFSKTYVGFPDGRFRYFDGRPGRAGYDPRQRGWYQAAVAAGKPVITAPYVGAT
SGELEISVAAPIYRGSRLVAVVSGDLPLAFITRTVAELSPTPNSFAFLIDDTGTLIAHPD
DALVLKPMSVLAAALTPETLASSNRLVAAGQSALVVDIQQRDYRMFSAELDSAGLGDTGW
RLALALDVADSDAPLYAQLWTTLAMTLLVLLGAAAVMSWIANRSLRGLALVRDALVDIAA
GEGDLTRRIQVSGRDEVAEIGNAFNRFVSTLNGVLSEIRLASGAVQTAAAEISQGSQDLS
SRTEQAAANLQETSASMEQISGTVAQSADSAHEADGLAKSASEVARRGGEVIGEVVTTMQ
GIDDDSRKITEIVSVMDSIAFQTNLLALNASVEAARAGEQGRGFAVVAGEVRTLAQRSSE
ASREIATLISSANERTRNGAEQVRVAGSTMNEIVASVMRVSEVIGEISHATQEQNHGVGQ
VSSAVAELDQVTQQNAALVEESAAAADALSEQSARLAEMVGRFRLDGPAQPPAMAPRSAG
TLSAQDSSPRAARPVATEELDWQAW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgccggtacaccgcatgcctgcatgccttgccaccgagggcagaccaacgcgc
tctgcgctggtgcccccggtccccttcccgatggattcgaaccaaggagtggcgatgttt
gcctcgttacgtgcgcgcatcacgttagcctgtgtggcgatagtgctggtggcgctggtg
gtcgtcagcagcctgaatgcctggaccacgttccgcaatacgcatgccgatgagagcgac
taccagcaacaggtgctgagatcgaacgccgcccagctgagccagtggttcagcgtgcat
atcaatgcggtgagcggcatcgcggccagtagcctcgagagcttccccgatgccgccttg
acccaggcgatgaagcagggcgacttcagcaagacctatgtcggcttcccggatggtcgt
ttccgttacttcgatggtcgcccggggcgggcagggtatgacccgcgccaacgtggctgg
tatcaggcggcggtggcggccggcaagcccgtcatcacggcgccctatgtcggagccacc
agtggcgagctggagatcagcgtggcggcgccgatctatcgcggctcacggctggtcgcc
gtggtcagtggtgatctgccgctggcgttcatcacccggacggtcgccgagctctcgccg
acgcccaacagcttcgcctttctgatcgacgataccggcacgctgatcgcccacccggat
gatgccttggtgctcaagccgatgagtgtactcgcagcggccctgacgcccgagaccctg
gccagcagcaatcgcctggtggccgctggccagtcggcactggtggtcgatatccagcag
cgtgattaccgcatgttcagtgccgagctggattcggcagggctgggagacaccggttgg
cgtctggcgctggccctggatgtggcggactcggatgcaccgctttatgcccagctgtgg
accacgctggccatgacgctgctggtgttgctgggagccgctgccgtgatgtcgtggatc
gccaaccgcagtctgcgcggcctggcgctggtgcgtgatgcgctggtggatatcgccgcg
ggcgagggcgatctcacgcgacgcattcaggtcagcgggcgtgatgaagtcgccgagatc
ggcaatgctttcaatcgcttcgtctcgactctcaatggcgtgctcagcgagattcgtctc
gccagtggtgcggtgcagaccgccgccgccgagatcagccagggcagccaggatctgtca
tcacgtaccgagcaggcggcggccaatctgcaggaaacctcggcctcgatggagcagatc
tccggtaccgtcgcccagtccgcggactccgcacatgaagctgacgggctggccaagtcg
gccagtgaggtcgcgcgtcgcggtggcgaggtgatcggagaggtcgttaccaccatgcag
ggcatcgatgacgactcgcgcaagatcaccgagatcgtcagtgtcatggattccatcgcc
ttccagaccaacctgctggcattgaatgcctccgtcgaggcagcccgcgccggcgagcag
gggcgtggcttcgcggtggtggccggtgaggtgcgtaccctcgcccagcgctcttccgag
gcatcgcgggaaatcgccacgctgatcagctccgccaatgagcgcacgcgtaatggtgcc
gaacaggtcagggtggccggcagcaccatgaacgagatcgtcgccagcgtcatgcgtgtc
agtgaggtgatcggcgagatcagccatgccacccaggagcagaatcacggtgtcggacag
gtctccagtgccgtggccgagctggaccaggtgacgcagcagaatgcggcgctggtcgag
gaatccgccgcggccgcggatgcgctttccgagcagtcggcgcgtctggccgagatggtg
ggccgcttccgtctggatggccctgcgcagccgccggcaatggcgccgcgcagcgcaggc
actctctccgcacaggactccagcccccgcgctgccagacccgtcgcaacggaggagctg
gattggcaagcctggtaa
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