KEGG   Cobetia sp. cqz5-12: F8A90_00545
Entry
F8A90_00545       CDS       T10568                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
cobc  Cobetia sp. cqz5-12
Pathway
cobc00300  Lysine biosynthesis
cobc00470  D-Amino acid metabolism
cobc01100  Metabolic pathways
cobc01110  Biosynthesis of secondary metabolites
cobc01120  Microbial metabolism in diverse environments
cobc01230  Biosynthesis of amino acids
Module
cobc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    F8A90_00545 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    F8A90_00545 (dapF)
Enzymes [BR:cobc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     F8A90_00545 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Draxin
Other DBs
NCBI-ProteinID: QQK62814
LinkDB
Position
complement(117700..118530)
AA seq 276 aa
MLVNFTKMHGLGNDFMVIDLISQRSRLRDADIRRLADRNFGIGFDQLLVVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVREQRLTTKREIRVETAGGPLTLVVAEDGRVRVDM
GAPRFAPAALPFEAEADLPVHTLDVEGETLEIGVVSMGNPHAVLLVESVEQAPVLTLGPL
IEAHPRFAKRVNAGFLEVVTPHEARLRVLERGVGETLACGTGACAAVASGIRRGLLASPV
NVTLPGGTLSIEWGGDGQPVFMTGPAETVFEGRIIL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctggtgaacttcaccaagatgcacggactgggcaatgacttcatggtcattgacctg
atctcgcagcgcagtcgcctgcgcgatgccgatatccgccgtctggcggaccgcaacttc
ggcatcggcttcgaccagctgctggtggtcgagccgccccgcgacccggacatggacttc
cgctatcgcatctacaatgccgatggcagtgaagtcgagaactgcggcaacggggcgcgc
tgcttcgcgcgcttcgtgcgtgaacagcgcctgaccaccaagcgcgagattcgcgtcgag
acggccggcggcccgctgaccctggtcgtggccgaagatggtcgtgtgcgcgtcgacatg
ggcgcgccgcgcttcgcccccgccgcgctgcccttcgaggccgaggctgacctgccggta
cacaccctggatgtcgagggcgagacgctggaaatcggcgtcgtctcgatgggcaacccc
cacgcggtgctgctggtcgagagtgtcgaacaggcccccgtgctgacgctcggcccactg
atcgaggcgcatccgcgcttcgccaagcgcgtcaatgccggcttcctcgaggtcgtcacg
ccccatgaagcgcgcctgcgtgtcctcgagcgcggcgtcggcgagacgctggcctgtggc
accggcgcctgtgcagcggtcgcttccggcattcgccgtggcctgctggcaagcccggtc
aacgtcacgctgcccggcggcaccctgagcatcgaatggggtggcgacggtcagccggta
ttcatgaccggccccgccgagaccgtcttcgaaggccgcatcatcctgtag

DBGET integrated database retrieval system