Cobetia sp. cqz5-12: F8A90_00770
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Entry
F8A90_00770 CDS
T10568
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F8A90_00770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobc03019
]
F8A90_00770 (pnp)
03016 Transfer RNA biogenesis [BR:
cobc03016
]
F8A90_00770 (pnp)
Enzymes [BR:
cobc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F8A90_00770 (pnp)
Messenger RNA biogenesis [BR:
cobc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F8A90_00770 (pnp)
Transfer RNA biogenesis [BR:
cobc03016
]
Prokaryotic type
tRNA degradation factors
F8A90_00770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
QQK62849
LinkDB
All DBs
Position
167518..169659
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AA seq
713 aa
AA seq
DB search
MNPVTHSFQYGNDTITLETGRIARQATGSVMVTMGNTSVLCTVVAKASPKPGQSFFPLSV
HYQEKAYAAGRIPGGFLKREGRPTEKETLTSRLIDRPMRPLFPEGFMNEVQVVCTVMSAE
RNVDPDIAALLGTSAALCISGVPFAGPVGAARVGFSEQRGYFLNPGYSELAHSELDMVVA
GTEKAVLMVESEAQELLEDEMLGAVLYGHHEMQKAITGIETFAAKVNRPKWAWVPQKLDR
VLVEALEQSFATQIGDAYRLSDKMARQDSLSALKAQAIDLLGAEDDARFSVEAVATAFAA
LEKRIVRQRVIAGEPRIDGRDTRTVRPLDMAVGVLPKAHGSALFTRGETQAIATATLGTT
RDSQLIEGLSGEKQDRFMLHYNFPPYCVGETGFIGAPKRREIGHGRLARRGIESMLPSLQ
AFPYAIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKDANGVAILT
DILGDEDHLGDMDFKVAGTAEGVTALQMDIKIEGIDEEILEQALEQALEARLTILAQMNE
VLAASRQEVSDNAPAMLSLKIAPSKVRDVIGKGGSTIRKICEETGANVDLDDDGSVRIYA
EHKAQAQAAAKYVEGIIAEAEIGKLYAGKVARIADFGAFITFMPGTDGLLHISQIVEERV
NDVRDYLNEGDEVVVKVLDIDNRNRVKLSLKEISEEEKAAFAAAQAEEAAAQD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaacgcacagcttccagtacggtaatgacaccatcaccctcgagaccggc
cgcatcgcgcgtcaggcgaccggtagcgtgatggtgaccatgggcaatacctcggtgttg
tgcaccgtggtggccaaggcgtcgccgaaacccggccagtccttctttccgttgtcggtc
cactatcaggagaaggcctacgcggcggggcgtatccccggcggcttcctcaagcgcgaa
gggcgtcccaccgaaaaggaaaccctgacctcacgcttgatcgaccgcccgatgcgcccg
ctgtttcccgaaggcttcatgaacgaggtgcaggtggtctgcacggtgatgtcggcggaa
cgcaatgtcgaccctgacatcgcggcattgctcggcacctctgcagcgctttgcatctcc
ggggtgcctttcgctggccccgtgggcgcggcgcgcgtcggcttcagcgagcagcgcggc
tactttttgaatcccggctacagcgaactggcgcattccgagctggacatggtggtggcg
ggcaccgagaaggccgtgttgatggtcgagtccgaagcgcaggagctgctggaagacgag
atgctcggcgccgtgctctatggtcatcacgagatgcagaaggccatcacggggatcgag
acgttcgccgccaaggtcaatcgtcccaaatgggcgtgggtgccgcagaagctcgaccgc
gtgctggtcgaggcgctggagcagagcttcgccacccagatcggtgatgcctatcgcctg
agtgacaagatggcgcgtcaggacagcctgtcggcgctcaaggcgcaggccatcgacctg
ctgggcgccgaggatgatgcacgcttcagtgtcgaggccgtcgccacggccttcgcggcg
ctagagaagcgtatcgtgcgtcagcgtgtgatcgccggtgagccgcgtatcgacggtcgt
gatacgcgcaccgtgcgaccgctggatatggcggtgggcgtgttgcccaaggcacatggc
tcggcactgttcacccgcggcgagacccaggcgatcgccactgccaccctggggaccacg
cgcgactcacagctgatcgaagggctgtccggcgagaagcaggaccgcttcatgctgcac
tacaacttcccgccttactgcgtcggcgagacgggcttcatcggcgcgcccaagcggcgt
gagatcggtcatgggcgtctggcgcgtcggggcatcgaatccatgctgccgtcgctgcag
gccttcccctacgcgatacgcgtcgtctccgagatcaccgaatccaatggctcgagctcg
atggcatccgtgtgtggggcttcgctcgcgctgatggacgccggtgtgccgctcaaggca
ccggtagcgggtatcgccatggggttggtcaaggacgccaatggcgtcgcgatactgacc
gatatcctcggcgatgaggaccacctcggcgacatggacttcaaggtcgcgggtaccgcg
gaaggcgttaccgcgctgcagatggacatcaagatcgaagggatcgacgaggagattctt
gagcaggcactggagcaggccctcgaggcacgtctgaccatcctcgcgcagatgaatgag
gtgctggccgccagccgccaggaagtctcggacaatgccccggcgatgctgtcgctgaag
atcgcacccagcaaggtacgtgacgtgatcggcaagggcggctccaccatccgcaagatc
tgtgaagagaccggcgccaatgtcgatctcgacgacgatggcagcgtgcgcatctatgcc
gagcacaaggcgcaggcgcaggcggctgccaagtacgtggagggcatcattgccgaggcc
gagatcggcaagctctacgccggcaaggtggcacgcatcgccgatttcggtgccttcatc
accttcatgccgggcaccgatggtctgctgcacatctcgcagatcgtcgaggagcgggtc
aatgacgtacgcgactacctcaacgaaggcgatgaggtggtggtcaaggtgctcgatatc
gacaaccgcaatcgcgtcaagctgtcgttgaaagagatcagcgaagaagagaaggcggcc
tttgccgctgctcaggctgaagaggccgccgcccaggactga
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