Cobetia sp. cqz5-12: F8A90_01090
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Entry
F8A90_01090 CDS
T10568
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc03030
DNA replication
cobc03410
Base excision repair
cobc03420
Nucleotide excision repair
cobc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F8A90_01090 (polA)
03410 Base excision repair
F8A90_01090 (polA)
03420 Nucleotide excision repair
F8A90_01090 (polA)
03440 Homologous recombination
F8A90_01090 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobc03032
]
F8A90_01090 (polA)
03400 DNA repair and recombination proteins [BR:
cobc03400
]
F8A90_01090 (polA)
Enzymes [BR:
cobc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F8A90_01090 (polA)
DNA replication proteins [BR:
cobc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F8A90_01090 (polA)
DNA repair and recombination proteins [BR:
cobc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F8A90_01090 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F8A90_01090 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QQK62898
LinkDB
All DBs
Position
231862..234750
Genome browser
AA seq
962 aa
AA seq
DB search
MAATPIVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVINMLKSLIRQYPDSPMAVVFD
AKGKTFRDDMYPEYKAQRPPMPDDLRLQVEPLHACVRALGLPLLCVEGVEADDVIGTLAR
LATEAGRDAVISTGDKDMAQLVNEHITLVNTMKNETLDVDGVTEKFGIPPNLIIDFLALM
GDKVDNIPGVPGVGEKTALGLLQGMGGGLDTIYGDLDRIKTLSFRGAKTLAKKMEAHRED
AYLSYRLATIKLDCELEHGLDDLAIAAPDTAALVELYREMEFKAWLKELLEGGDMAATPH
ADEKDSGVAGGDLFGDSIAPVADKASAKGKAAAAPTPELDAAGDEDEMPEALPPREERNY
RAITEQAELDAWLERVRNATSLCFDLETTSLNYMEAEIVGIGMALEVGEAVYIPVAHSYL
DAPAQLDRQAVLEALTPILADTAITKIGQNLKYDIEVLARYDIAVAGPLADTMLMSYVLN
STATRHDMDSLALKYLGESTISFTDIAGKGAKQLTFDQIALEEAMPYACEDVDITLRLAA
LLMPRIEKLGRLGEVLRDYEYPLIPVLARIERNGVAIDPERLHVQTRELTEQIHDIEKQA
FELAGREFNLSSPKQLGEILFEEQKLPVKKKTPKGAPSTAEAVLEELALDYPLPKLIMRH
RGMTKLKSTYTDKLPQLVNPTTRRLHTSYHQAVTATGRLSSSDPNLQNIPVRSEEGRRIR
QAFIARPGYRIVAADYSQIELRIMAHLSGDKGLLSAFADNRDVHAATAAEVFGTEEAKVS
SDQRRSAKAINFGLIYGMSAWGLSRQLDIDPGQAKTYIERYFERYPGVATYMEDTRHLAA
EQGYVETIFGRRLYLPEIGSRNHARRSAAERTAINAPMQGSAADIIKRAMIDVDAWLAGN
DGDKAYDAMMVMQVHDELVFEVAEAQVEDFMKDVAQRMQNAASLDVPLLVEVEQGDNWEE
AH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacgccgatcgttctcgtcgatggatcttcctacctctatcgtgcctttcac
gccctgccgccgctgaccacctccaagggcctgcccaccggtgcggtgaagggcgtgatc
aacatgctcaagagcctgattcgccagtatccggacagtcccatggcggtggtgttcgac
gccaagggcaagaccttccgcgatgacatgtaccccgagtacaaggcccagcgtccgccg
atgcccgatgacctgcgcctgcaggtcgagccgctgcatgcctgcgtgcgcgcgctgggc
ctgccgctattgtgcgtggaaggtgtcgaggccgatgacgtcatcgggactcttgcgcga
ctggccaccgaggccggacgtgacgccgtcatctccaccggcgacaaggacatggcccag
ctggtgaacgagcacatcacgctggtcaacaccatgaagaacgagacgctggacgtggac
ggcgtcaccgagaagttcggcattccgcccaatctgatcatcgattttctcgcgctgatg
ggcgacaaggtcgacaacatccccggcgtgccgggcgtgggcgagaagaccgcactgggc
ctgctgcagggcatgggcggcggtcttgacaccatctacggtgacctcgatcgcatcaag
acgctcagcttccgcggcgccaagaccctggccaagaagatggaagcgcatcgcgaggat
gcctatctctcctatcgtctcgccaccatcaagctggactgcgagctggagcatggcctg
gatgacctcgcgatcgccgcgccggacaccgccgcgctggtcgagctctaccgcgagatg
gagttcaaggcctggctgaaggagctgctggaaggcggcgacatggcggccacgccgcac
gccgacgagaaggacagcggggtcgccggtggtgatctgttcggcgacagcatcgcgccg
gtcgcggacaaggcctccgccaagggcaaggccgccgctgcaccgacgcctgagctggat
gcggcgggtgacgaggacgagatgcccgaggcgctgccgccgcgtgaggagcgcaactac
cgcgccatcaccgagcaggcagagctggacgcgtggctggagcgcgtgcgcaacgccacc
tcgctgtgcttcgacctcgagaccaccagcctcaactacatggaagccgagatcgtcggc
atcggcatggcgctggaggtcggcgaggccgtctacatccccgtcgcccacagctacctg
gatgcccccgcgcagctggatcgccaggccgtgctggaggcgctgacgccgattctcgcc
gataccgccatcaccaagatcggccagaacctcaagtacgacatcgaggtgctggcgcgc
tatgacatcgcggtggccggcccgctggccgacaccatgctgatgtcctacgtgctcaac
tccaccgcgacccgtcacgacatggactcgctggcgctcaagtatctgggcgagagcacc
atcagcttcaccgacatcgccggcaagggcgccaagcagctgacgtttgaccagatcgcg
ctggaagaggcgatgccgtatgcctgcgaggatgtcgacatcaccctgcgcctcgccgcg
ctgctgatgccgcgcatcgagaaactggggcgtctgggtgaggtgctacgtgattacgaa
tacccgctgattccggtgctggcgcgcatcgagcgcaacggcgtcgcgatcgaccccgag
cgcctgcacgtccagacccgtgagctgaccgagcagatccacgacatcgagaagcaggcc
ttcgagctggcgggccgcgagttcaatctctcctcgcccaagcagctgggcgagatcctc
ttcgaggagcagaagctgccggtcaagaagaagacccccaagggtgcgccgtccaccgcc
gaagccgtgcttgaggagctggcgctggactacccgctgcccaagctgatcatgcgccat
cgcggcatgaccaagctcaagagcacctacaccgacaagctgccgcagctggtcaacccg
accacgcgtcgcctgcacaccagctaccatcaggccgtcactgccaccgggcgtctgtcc
tcgtcagacccgaacctgcagaacatcccggtgcgcagcgaagaggggcgtcgcattcgt
caggccttcatcgcacgcccgggctatcgcatcgtcgcggcggattactcgcagatcgag
ctgcgcatcatggcgcacctctccggtgacaagggcctgctctcggccttcgccgacaat
cgcgacgtgcacgccgccaccgcggcggaagtcttcggcaccgaggaagcgaaggtcagc
agtgaccagcgtcgcagcgccaaggccatcaacttcggactgatctatggcatgtccgcc
tggggcctctcgcgtcagctggatatcgaccccggccaggccaagacctacatcgagcgc
tacttcgagcgctatccgggcgtcgccacctatatggaagacactcgccatctcgccgcc
gagcagggctatgtcgagaccatcttcggccgtcgtctctacctgccggaaatcggctcg
cgcaatcacgcgcgccgcagcgccgccgaacgcaccgccatcaacgccccgatgcaaggc
agcgccgccgacatcatcaagcgcgccatgatagacgtggacgcctggctggcgggcaat
gacggtgacaaggcgtacgacgccatgatggtcatgcaggtacacgatgaactcgtcttc
gaagtcgccgaagcgcaggtcgaagacttcatgaaagacgtcgcccagcgcatgcagaac
gccgcctcccttgacgtcccgctgctcgtcgaagtcgagcaaggcgacaactgggaagaa
gcgcattaa
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