Cobetia sp. cqz5-12: F8A90_01170
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Entry
F8A90_01170 CDS
T10568
Name
(GenBank) HlyD family secretion protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobc02000
]
F8A90_01170
Transporters [BR:
cobc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F8A90_01170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
FBF1
CMV_US
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
QQK62908
LinkDB
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Position
249752..251029
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AA seq
425 aa
AA seq
DB search
MTAAARALASAVAASSAASDRLHACHRQAARESRRMNKAGKGVVALIVVAGVIAGGVMGA
EWWQVGRFMQETDNAYVRTDSVAVRSEITARVTRMLVHDNQPVKKGQLLVQLDDEDARAN
LDQASAALDNARTGEVQAERQLDLQDAKIDEAKAALASAKAERDQAALHLKRSRSLESRS
YASRQSYEDDQVTLRTAEAKVAQQNAALASARQQLEVYKAQLESARAQVVSAAADLAYAR
HQLEKTSIYAPQDGVVGNRSVEVGTMASASLTLMQLVPVKSAYVVANYKETQTERMRVGQ
PVSLEVDAYPDIEFEGVVDSLAPATGTEFSLLPTDNATGNFNKIVQRVPVRIRLTGPEDA
LPRLRAGLSVIPSVDTRELPDTGTYAVDALSREAISDGVIADHVIANHVIAPVAAQVAGA
DRGAQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcggcccgagcgctcgcaagtgccgtggccgcctcatccgcagcgtcagac
agattacacgcctgtcatcgacaggcagcaagagagagtcgccgaatgaacaaggcaggc
aagggtgtcgtggcactcatcgtggtggcgggcgtgatcgctggcggagtgatgggggcc
gaatggtggcaggtcgggcgcttcatgcaggaaaccgacaacgcctatgtgcgtaccgac
agcgtcgcggtgcgctccgagatcaccgcgcgggtgacgcgcatgctggtgcatgacaac
cagccggtgaagaaggggcagttgctggtgcagctggatgacgaggatgccagggccaat
ctggaccaggccagtgccgcgctggacaacgcgcgtaccggggaagtccaggccgagcgt
cagctggacctgcaagacgcgaagatcgacgaggccaaggccgcgctggcctcggccaag
gctgaacgcgatcaggcggcgctgcatctcaagcgctccagaagtctggagagccgcagc
tacgcctcgcgtcagtcctatgaggatgatcaggtcaccctgcgcaccgccgaggccaag
gtggcgcagcagaacgcggcactggcgtccgcgcgtcagcagctggaggtctacaaggcg
cagctggagtcggcgcgtgcccaggtggtgtcagcggcggcggatcttgcctacgcgcgc
caccagttggagaagacctcgatctacgcgcctcaggacggcgtggtcggcaatcgcagt
gtcgaggtgggcaccatggccagcgcgtcgctgaccctgatgcagctggtgccggtgaaa
agtgcctatgtggtggccaactacaaggaaacccagaccgagcgcatgcgcgtcggccag
ccggtcagtctcgaggtggatgcctacccggacatcgagtttgagggtgtggtggacagc
ctggcgccggcgactggtaccgagttcagcctgctgccgaccgacaacgccaccggcaac
ttcaacaagatcgtccagcgtgtgccggtgcgcattcgcctgaccggccctgaggatgcg
ttgccgcgtctgcgcgctggcctgtcggtcatccccagcgttgatacgcgtgaactgccg
gacaccggcacctatgccgtcgatgccctctccagggaggccatctctgacggtgtcatc
gccgaccacgtcatcgccaaccacgtcatcgcgcccgttgccgcacaggtcgctggcgct
gatcgcggagcgcagtaa
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