Cobetia sp. cqz5-12: F8A90_02585
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Entry
F8A90_02585 CDS
T10568
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cobc Cobetia sp. cqz5-12
Brite
Enzymes [BR:
cobc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
F8A90_02585
Transfer RNA biogenesis [BR:
cobc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
F8A90_02585
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQK63137
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Position
complement(597587..599533)
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AA seq
648 aa
AA seq
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MLQNNSLLAQLKDQIRQEIPRVTGVIKGTDKGFGFLECEDGESYFVPPPAMKQVLHGDTV
EATVKVEGEKKSVQPEVLIETGVDRFVARVGKRDGRLNVMPDHPSINTRMKARVKRGINE
EALNDGDWVVARLLRHPMRKDDRSFFAQIEEVIATVDNPRVPWRVTLARHALEQASPEGG
NDWPLLEEGLTREDMTHVPFFTIDGEKTRDMDDALHIVERPEGGWTLSIAIADPTAYVPE
GSRVDEEARTRSFTVYLPSQNVTMLPEILADDLCSLKEGEDRPTLMCIVDIDTDGVIGEP
KFFAATMRSHHRLTYDNVSDWIEGQEGSWKPETEELAEGLRQLEAFTQARIAWRARNSQV
FRERPDFEFELDEEGNVLNVRADHRRISNRMIEESMITANLSCARLLSKHIGHGIFNVHQ
GFAPEKYDDTIEFLAGQNITATPEQLGSLEGYRLIRQELDSREDTWLDVRMRRFQGYTVM
SAQPGPHFGLGLEAYATWTSPIRKYGDMVNHRLIKRVILGQDVPAEATEQLTEHLSERRR
LNRMAERDVKDWLYVRYLTKAAEEQQVFTGEIIDIRRGGMRVRLEENGASVFIPAPLIHS
DRKKVAIDDKEGRVRIEDELRYSLGDIIKVSLTEAREERRSLVGRPAE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaacaattcgctgctggcgcagctgaaagatcaaatccgccaggaaattccc
cgtgtcacgggggtgatcaaaggcaccgacaagggcttcggcttcctcgagtgcgaggac
ggcgagtcttacttcgtgccgccacccgccatgaagcaggtactgcacggcgataccgtc
gaagcgaccgtcaaggtggaaggtgagaagaagtccgtacagccggaagtgctgattgag
acgggtgtcgatcgcttcgtcgctcgtgtcggcaagcgtgatggccgcctgaacgtgatg
ccggatcatccctccatcaacacgcgcatgaaagcgcgcgtgaagcgtggcatcaatgag
gaagccctcaatgatggcgactgggtcgtggcacgtctgctgcgtcacccgatgcgcaag
gatgaccgcagcttcttcgcccagatcgaggaagtcatcgccaccgtggacaatccgcgt
gtgccgtggcgcgtcaccctggcgcgtcacgcgttggaacaggcctctccggagggcggc
aatgactggccgctgctcgaggaaggcctgactcgcgaagacatgacccacgtgcccttc
ttcaccatcgatggtgagaagacgcgtgacatggatgacgccctgcacatcgtcgagcgc
ccggaaggcggctggaccctgagcatcgccatcgcggacccgaccgcctacgtgccggaa
ggcagccgtgtcgacgaggaggcgcgcacgcgctccttcaccgtctacctgccgagccag
aacgtcaccatgctgccggaaatcctggccgatgatctgtgctcgctgaaggaaggtgaa
gaccgtccgacgctgatgtgcatcgtcgacatcgataccgatggcgtgatcggcgagccg
aagttcttcgcggccaccatgcgctcccaccaccgcctgacctacgacaacgtctctgac
tggatcgaaggccaggaaggcagctggaagccggaaaccgaagagctggccgaaggtctg
cgtcagctggaagccttcacccaggcgcgcatcgcctggcgtgcacgcaattcgcaggtc
ttccgcgagcgtccggacttcgagttcgagctggatgaggaaggcaacgtgctcaacgtg
cgtgccgaccaccgccgcatcagcaatcgcatgatcgaagaatccatgatcaccgcgaac
ctgagctgcgcacgtctgctctccaagcacatcggtcacggtatcttcaacgtgcaccag
ggcttcgcaccggagaagtacgacgacaccatcgagttcctggctggccagaacatcacc
gccacgccggaacagctgggcagcctggaaggctaccgcctgatccgtcaggagctggac
agccgcgaagatacctggctggacgtgcgcatgcgtcgcttccagggttacaccgtgatg
tccgctcagccgggaccgcacttcggactgggtctggaagcctacgcgacctggacctcg
ccgatccgcaagtatggcgacatggtcaaccaccgcttgatcaagcgcgtgattctcggc
caggacgtgccggcggaagccaccgagcagctgaccgagcacctcagcgaacgtcgtcgt
ctcaaccgcatggcggagcgcgatgtgaaggactggctctacgtgcgctacctgaccaag
gccgccgaagaacagcaggtcttcactggcgagatcatcgacatccgtcgtggcggcatg
cgtgtgcgtctggaagagaatggcgccagcgtcttcattccggcaccgctgatccacagc
gatcgcaagaaggtcgcgatcgatgacaaggaaggccgcgtgcgcatcgaagacgagctg
cgttactcactgggcgacatcatcaaggtttccttgaccgaagcccgtgaagagcgtcgt
tcactggtgggtcgtccggccgaataa
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