Cobetia sp. cqz5-12: F8A90_02950
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Entry
F8A90_02950 CDS
T10568
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc00071
Fatty acid degradation
cobc00280
Valine, leucine and isoleucine degradation
cobc00310
Lysine degradation
cobc00362
Benzoate degradation
cobc00380
Tryptophan metabolism
cobc00410
beta-Alanine metabolism
cobc00640
Propanoate metabolism
cobc00650
Butanoate metabolism
cobc00907
Pinene, camphor and geraniol degradation
cobc00930
Caprolactam degradation
cobc01100
Metabolic pathways
cobc01110
Biosynthesis of secondary metabolites
cobc01120
Microbial metabolism in diverse environments
cobc01200
Carbon metabolism
cobc01212
Fatty acid metabolism
Module
cobc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
F8A90_02950 (fadB)
00650 Butanoate metabolism
F8A90_02950 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
F8A90_02950 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
F8A90_02950 (fadB)
00310 Lysine degradation
F8A90_02950 (fadB)
00380 Tryptophan metabolism
F8A90_02950 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
F8A90_02950 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
F8A90_02950 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
F8A90_02950 (fadB)
00930 Caprolactam degradation
F8A90_02950 (fadB)
Enzymes [BR:
cobc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
F8A90_02950 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
F8A90_02950 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
F8A90_02950 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
F8A90_02950 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
QQK63194
LinkDB
All DBs
Position
695653..697803
Genome browser
AA seq
716 aa
AA seq
DB search
MIYSGKTLTVEANQDAIALLTLDLEGESVNKLASYVLKELGEAVEAIQATADLKGLVIRS
AKEAFVVGADITEFHQMFEKDEAFLIDMNMNIHGIFNAIEDLPFPTVTAINGLALGGGCE
ITLTTDFRVMADSAKIGLPETKLGIIPGWAGCVRLPRLIGADNAIEWICGGTENRADKAL
AVGAVDAVLPVAELDAAALDILARANAGELDYQARRLEKTSPLKLNAIEQMMAFETAKGF
VAGKAGPHYPAPVEAIKVIQKGAGESRERAQAIEAKTFARMALTDVAFNLVGLFMNDQVV
KKKAKGYEKQASEIKQAAVLGAGIMGGGIAYQSASKGTPILMKDINGEAIELGLKEARKL
FGKGVERGKLTTEKMAQGLSNIRPTLSYGDFGNVDLVVEAVVENPKVKASVLAELEDNVA
EDAILTSNTSTISITRLAESLKRPENFCGMHFFNPVHRMPLVEVIRGEKSSDAAIAATVA
YARQMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANAVMAEGFPDRMAREGKTAIQVMYDNKRLGQKNDLGFYRYEEDRKGKP
KKLADDEAQALVAQVVSETREFSDEDIIARMMVPLCMETIRCLEDGIVGTAAEADMALIY
GIGFPPFRGGALRYVDAMGVAEFVALADSLADELGPLYRPTEALRERAKRGDAFYS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggcaaaacgctaaccgtcgaggccaaccaggacgccattgccctgttg
accctcgatcttgaaggcgaatcggtcaacaagctggccagctatgtgctcaaggagctg
ggagaggcggtcgaggccatccaggcgacggccgatctcaaggggctggtcatccgctcc
gccaaggaggcgttcgtggtcggtgccgacatcaccgagttccatcagatgttcgagaag
gatgaagccttcctcatcgacatgaacatgaacatccatggcatcttcaatgccatcgag
gacctgccgttccccaccgtcactgccatcaatgggctggcgctgggcggcggctgcgag
atcaccctgaccaccgatttccgggtcatggccgacagcgccaagatcggcctgccggaa
accaagctcggcatcatcccgggctgggcgggttgtgtacgcctgccacgcctgatcggg
gcagacaacgccatcgagtggatctgtggcggtaccgagaaccgtgccgacaaggcgctg
gcagtgggcgccgtcgatgccgtcctgccggtggccgagttggacgctgcggcactcgac
attctggcgcgtgccaatgccggcgagctggactatcaggcgcgtcgcctcgagaagacc
tcgccgctcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccggcaaggccggcccgcattatccggcaccggtggaggccatcaaggtcatccag
aagggcgcgggggaatcgcgtgagcgtgcccaggccatcgaggccaagaccttcgccagg
atggcgctgaccgacgtggccttcaatctggttggcctgttcatgaacgatcaggtggtc
aagaagaaagccaagggttacgagaagcaggccagcgagatcaagcaggccgccgtgctg
ggggccggtatcatgggcggcggtatcgcctatcagagcgccagcaagggcacgccgatc
ctgatgaaggacatcaacggcgaggccatcgaactgggcctgaaggaagcacgcaagctg
ttcggcaaaggcgtcgagcgcggcaagctgaccactgaaaagatggcgcagggcctgtcc
aacattcgcccgacgctgtcctacggtgacttcggcaatgtggacctggtcgtcgaggcg
gtggtcgagaatcccaaggtcaaggcctcggtgctggccgaactcgaggacaacgtcgcc
gaggacgccatcctgacctccaacacctcgaccatctccatcacgcggctggccgaatcg
ctcaagcgccccgagaacttctgtggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaagtccagcgatgcggccatcgccgcgaccgtcgcc
tatgcccgccagatgggcaagacgccgatcgtcgtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccctatttcggtggtttcagcctgctggtcgagaagggcgccgac
tatcagcgcgtcgacaaggtgatggagaagttcggctggccgatgggcccggcctacctg
ctggatgtggtcggcatggataccgcggtgcacgccaatgccgtgatggcggaaggtttc
ccggaccgcatggcgcgtgaaggcaagacggccatccaggtgatgtacgacaacaagcgc
ctcggccagaagaatgatctgggcttctaccgctacgaggaagaccgcaagggcaagccg
aagaagctggcggacgatgaggctcaggcgctggtggcccaggtcgtcagcgagacgcgc
gagttctccgatgaagacatcatcgcgcgcatgatggtgccgctgtgcatggaaaccatt
cgctgcctggaagacggcatcgtcggtacggcggccgaggccgacatggccttgatctac
ggcatcggtttcccgccgttccgtggtggcgcgcttcgctacgtcgatgccatgggcgtg
gccgagttcgtcgcgctggccgacagcctggccgatgagctggggccgctgtatcgcccg
accgaggcgctgcgcgagcgcgccaagcgtggcgacgccttctactcctga
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