Cobetia sp. cqz5-12: F8A90_03255
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Entry
F8A90_03255 CDS
T10568
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobc03000
]
F8A90_03255
03036 Chromosome and associated proteins [BR:
cobc03036
]
F8A90_03255
Transcription factors [BR:
cobc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
F8A90_03255
Chromosome and associated proteins [BR:
cobc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
F8A90_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
MarR
HTH_Crp_2
HTH_20
DDRGK
HVO_A0114
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
QQK63240
LinkDB
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Position
765987..766487
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AA seq
166 aa
AA seq
DB search
MKAKSRSLDRIDLKILRCLQENARISYVDLASEVGLSTTPCLERVKRLERAGVIRGYKAV
LDPKALKANLLVFVEISLETQSPSVFDEFRRAVSKLPQIQECHLVSGQFDYILKCRIPEM
SAYRQLLGDVVLTLPGVKESKSYVVMEEVKEQFSLHVPDIEELDAK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaatcacgctctctggaccgcatcgacctcaagattctgcgttgcctgcaa
gagaatgcccgcatctcctatgtcgacctcgcctcggaagtcggcctttccaccacgccg
tgcctggagcgcgtcaaacgcctcgagcgtgccggcgtcatccgcggttacaaggcggtg
ctcgaccccaaggcgctcaaggccaatctgctggtcttcgtcgagatcagtctcgagacg
cagtcgccgtcggtgttcgatgaattccgccgcgccgtctccaagctgccgcagatccag
gaatgtcatctggtctccggtcagttcgactacatcctcaagtgccgaattccggaaatg
tccgcctatcgtcagctgcttggcgatgtggtgctgacgcttcccggtgtcaaggaatcc
aagagttatgtggtgatggaagaggtcaaggagcagttctcgctgcatgtgcccgatatc
gaggagctggatgccaagtag
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integrated database retrieval system
