Cobetia sp. cqz5-12: F8A90_06050
Help
Entry
F8A90_06050 CDS
T10568
Name
(GenBank) AAA domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cobc Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobc03000
]
F8A90_06050
Transcription factors [BR:
cobc03000
]
Prokaryotic type
Helix-turn-helix
Other families
F8A90_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_3
HTH_30
HTH_7
AAA_7
HTH_23
HTH_28
HTH_11
HTH_22
HTH_29
nSTAND6
Xre-like-HTH
HTH_psq
DUF815
Motif
Other DBs
NCBI-ProteinID:
QQK65844
LinkDB
All DBs
Position
complement(1399045..1401108)
Genome browser
AA seq
687 aa
AA seq
DB search
MTARHHSASHVDNHVDNHVDNHVDNHTATTPAHSTPHPAAAPLALQHSSLVCPPEELVWR
QRQAASLMATVASAVVGHTLNLLDHWQACLVLTDRDGVVLASYGHQQLLGNEAALLHPGA
RWREESLGHNAIAETLNAPRANRLARIALEAHDAECLKGLASASAALLAPASWSASRGLT
PGACEGCLGLICDPYRVRQYSLGMLGVLADDIEQRRLGEAHGHDHHLLRLHLNRSQLDSP
SAALLAVTPQGQVAAASRRGLQLLAAHLELPPSPGCAERPADNDSCATRDDLHLLLGQPL
ARWQLDWAPLARLDDAECLMLSQHPHFTGYTLCSVLPRPRIQARAPASPPTDERAGPLAT
QAAACHPSLARLHHGDAGWARVCELLARLVNAHLPLLLQGETGVGKEEVVKALHQASHRA
HQPLVAINCAALPDELVEAELFGYRRGAFTGADPAGREGRLIEANGGRLFLDEIGDMPLH
VQARLLRVLQEREVTPLGGGKPQRVDFELVAATHQPLSELVKAGRFRADLYYRLCGASIT
LPPLRERHDIAGLSRALLTRLCREQQRELPRITPAFLDRLTRHDWPGNVRELDNVLRLAL
VLCDGPVLEPCHVILAGDCLASQNDCPASENEIAHQPSQPTGLPSLHDLSSAEELQSALD
ALGGNVSRLARELGISRTTLYKRLGAA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgccatcattccgccagccacgtcgacaaccatgtcgataaccacgtcgat
aaccacgtcgataaccacaccgccaccaccccagctcactccacgccccatcccgccgct
gctcccctggcacttcagcattcctcactggtatgtccgccggaagagctcgtctggcgt
cagcgtcaggccgccagcctgatggcgacggtggcgtcagcggtggtcggccataccctc
aacctgctcgatcactggcaggcgtgtctggtactgaccgaccgcgacggcgtggtgctg
gcaagctacggccatcaacagctgctgggcaatgaggccgccctgttgcaccctggcgcg
cgctggcgtgaggagtcgctgggtcacaacgccatcgccgagaccctgaatgcgccgcgc
gccaatcgcctggcacgcatcgccctcgaggcgcatgacgccgaatgcctcaaggggctg
gccagcgccagtgccgcactgctggcgcccgccagctggagtgccagtcgcggcctgacg
cccggcgcctgcgaggggtgcctgggactgatctgcgatccctaccgtgtgcgccagtac
agcctcggcatgctcggggtactggcggatgacatcgagcaacgccgtctgggcgaggca
catgggcacgaccatcacctgttgcgcctgcatctcaaccgctcgcagctggactcgccc
agcgcggccctgctggccgtcacgccgcaaggtcaggtcgcggccgccagtcgcagaggg
ctgcaactgctggcagcgcaccttgagctcccgccatcgccaggttgcgcggaacgcccc
gcggacaacgacagctgcgccacccgcgatgacctccatctgttgctgggccagcccctg
gctcgctggcagctggactgggcaccgttggcccggcttgacgacgcggaatgcctgatg
ctgtcgcaacacccgcatttcacgggctacaccttgtgcagtgtcctgcccaggccacgc
attcaggcacgcgcaccagccagcccccccaccgatgagcgagctggcccgctggccact
caggccgctgcctgccacccgagccttgcgcgcctgcatcacggcgatgccggctgggcc
agggtctgcgaactgctggcgcgactggtgaacgctcacctgccactgctgctgcagggc
gagacaggtgtcggcaaggaagaagtggtcaaggcgctgcatcaggccagtcatcgcgcc
catcagccgctggtcgccatcaactgcgcggcattgcctgatgagctggtcgaggccgag
ctgttcggctatcggcgcggcgcctttaccggtgccgaccccgccggacgcgaaggccgc
ctgatcgaggccaatggcgggcgtctgttcctggatgagatcggcgacatgccgctgcat
gtccaggcgcgtctgctgcgcgtgctgcaggaacgtgaagtcacgccgctgggcggcggc
aagccgcagcgagtcgacttcgaattggtggccgccacccaccagcccctcagcgagctg
gtcaaggccgggcgcttccgggcggacctctactatcgcctgtgtggcgccagcatcacc
ttgccgccgctgagggagcgtcacgacatcgccggcctgagtcgtgccctgctgacacgg
ctgtgtcgagagcagcaacgtgagctgccgcgcatcacgcccgcctttctcgatcgtctc
acccgacatgactggcccggcaacgtgcgcgaactggacaacgtgctgcgtttggcgctg
gtactgtgcgatgggccggtcctggagccgtgccatgtgatactggcgggcgactgtctc
gcatcacagaatgattgtcccgcatcagagaacgagattgcccaccagccctcgcaaccg
accggcctgccctcgctgcatgatctctccagtgccgaggagctgcagagcgcgctggac
gcgctgggcggcaacgtctcgcgtctcgcgcgggagctcggcatcagccgcaccacactc
tacaagcgactcggcgcggcctga
DBGET
integrated database retrieval system
