KEGG   Cobetia sp. cqz5-12: F8A90_06815
Entry
F8A90_06815       CDS       T10568                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cobc  Cobetia sp. cqz5-12
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cobc02044]
    F8A90_06815 (tssC)
Secretion system [BR:cobc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   F8A90_06815 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SurA_N_3
Other DBs
NCBI-ProteinID: QQK63866
LinkDB
Position
1591068..1592567
AA seq 499 aa
MSDNRSESAVAPQAQDTVFAPQSSLLDSIISESRVARSETERTRARDLIEELVAQVLDGE
VMPSKDLIAVLDARIAEIDAMLSEQMNEVMHASEFQKLESSWRGLRYLVDQTETGSNMKI
QMLNATKKELVRDLKSAPEFDQSALFKKVYEEEYGTFGGAPFGMLVGDYEFSRSPEDIYL
LEQISHVAASAHAPFISAASPELFGWDSFTEMSGPRDLSKIFDTVEYAKWKSFRNSEDAR
YVGLTLPHVLGRLPYGPDTTPVEEFNFVENVDGREHNKYLWMNAAYAMGSRVTDAFANYG
WCVAIRGVEGGGLVENLPTHTFQTDDGEVALKCPTEIAVTDRREKELADLGFIPLVHCKG
TDYAAFFGTQSAQKQKTYNTDVANANARLSSQMQYIFATSRIAHYMKAIMRDKVGSFASR
TSVERYLNDWLSQYVLLDDNASQEAKAQFPLREARVEVAEVPGKPGVFKAVTFLRPHYQL
DELTASLRLVAELPQSTRS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgagtgacaatcgtagtgaatcagcagtggcaccgcaggcacaggataccgtcttcgcg
ccgcagtcttccttgctcgacagcatcatctccgagagccgcgtggcgcgctccgagacc
gagcgcacccgtgcacgcgacctgatcgaagagctggtcgcccaggtgctggacggcgag
gtcatgcccagcaaggacctcatcgccgtgctggatgcgcgtatcgccgagatcgacgcg
atgctctccgagcagatgaacgaagtcatgcacgccagtgagttccagaagctggaatcc
tcctggcgcggtctgcgctatctggtcgatcagaccgagaccggcagcaacatgaagatc
cagatgctcaacgccaccaagaaggaattggtgcgtgacctgaaatcggcgccggaattc
gatcagagcgcgctgttcaagaaggtctacgaagaagagtacggcacctttggtggcgcg
ccgttcggcatgctggtcggcgattacgaattctcgcgcagcccggaagacatctatctg
ctggagcagatctcccacgtggccgcctcggcgcacgcacccttcatctccgcggcgtct
ccggagctgttcggctgggactccttcaccgagatgagcggtccgcgtgatctgtccaag
atcttcgacaccgtcgaatacgccaagtggaagtccttccgcaactccgaagatgcgcgc
tatgtcggtctgacgttgccgcacgtgctgggccgtctgccgtatggcccggacaccacg
ccggtcgaggaattcaacttcgtcgagaacgtcgatggccgtgagcacaacaagtatctg
tggatgaacgcggcgtacgccatgggctcccgcgtgaccgatgccttcgccaactatggc
tggtgtgtcgccattcgcggtgtcgaaggcggtggcctggtcgagaacctgccgacccac
accttccagaccgacgatggcgaagtggcgctgaagtgcccgaccgagatcgccgtgacc
gaccgtcgcgagaaggagctggcagacctgggcttcatcccgctggtgcattgcaagggt
acggactacgccgccttcttcggcacccagtccgcccagaagcagaagacgtacaacacc
gacgtggccaacgccaacgcgcgcctgtcctcgcagatgcagtacatcttcgccacctca
cgcatcgcgcactacatgaaggcgatcatgcgtgacaaggtcggcagcttcgcctcgcgc
accagtgtcgagcgctacctgaacgactggctgtcccagtacgtgctgctggacgacaac
gccagccaggaagccaaggcacagttcccgctgcgtgaagcacgtgtcgaagtcgcggaa
gtcccgggcaagccgggtgtcttcaaggccgtgaccttcctgcgtccgcactaccagctg
gatgaactgaccgcctcgctgcgcctggtcgcagagctgccgcagtccactcgcagctga

DBGET integrated database retrieval system