KEGG   Cobetia sp. cqz5-12: F8A90_06835
Entry
F8A90_06835       CDS       T10568                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
cobc  Cobetia sp. cqz5-12
Pathway
cobc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F8A90_06835 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cobc02044]
    F8A90_06835 (tssH)
Secretion system [BR:cobc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   F8A90_06835 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 ATPase_2 nSTAND3 Sigma54_activat AAA_7 AAA_14 TniB PilJ Zeta_toxin IstB_IS21 NACHT Clp_N TsaE AAA_30 AAA_24 T2SSE DUF815 SLFN-g3_helicase Hpr_kinase_C CENP-H
Other DBs
NCBI-ProteinID: QQK63869
LinkDB
Position
1596170..1598866
AA seq 898 aa
MSLKTLFAKLNDVSRGAMEEAAGLCLAKRQYEVDVEHLLIKLLDGDDNDLLRIARHYSLG
LDQLADQLDRSLERLKTGSTATPALSPHITRLIEKAWLIASIDHEVAHIRSGHLLLALLE
DPELARVIRSDMPGLENPFERIDVADLRLHFTSLLAASPEAELSQSTPPAASSGGQTAGE
GGASARPGSHKTPALDQYTIDLTASARDGNIDPILGRDDEVRQMIDILTRRRQNNPILTG
EAGVGKTAVVEGLAQKIVAGEVPAPLARVELRTLDLGLLQAGASVKGEFEQRLKDVIEEV
KRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKD
AALARRFQVIKVEEPAEPQAIDMLRGLATRMRDHHKVEILDDAIVQAVRLSSRYITGRQL
PDKAVSVLDTACARVALGQQTTPAPLQDARQRLRDLEAEREALAREHERGDDSHAPRLDE
IDTEVLAITAQVTALEADWTRQREAVEAVLKADAALNEVNDKSNDEGSDAANDAARESAL
EELRAARAVLEEAGGEAPLVHACVDGNAIGEVVAAWTGIPLGKMQRDEIDTVRRLPALLG
ERVLGQGHALEEIGKRISLSRAKLEDPNKPIGVFMLLGPSGVGKTETALALADTLYGGER
NLITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVL
EVFFQVFDKGVMDDGEGREIDFRNCVILLTSNVGTDEIMNRCLGVATPPAPEALVEGLRD
TLNGVFKPAFLGRLKVVPYYPVHSDILARIVDLKLSRLAARFTRNHGAHLSFDSSLAHHI
AERCTQTDSGARSIDHLLSGSMMPPLVEWVLERMADQQPVGDIRIALDDAGQFTYEMQ
NT seq 2697 nt   +upstreamnt  +downstreamnt
gtgagtctcaagacgctattcgccaagctcaatgatgtcagccgcggtgccatggaagag
gcggcgggtctgtgccttgccaagcgccagtatgaagtcgatgtcgagcatctgctgatc
aagctgctggatggcgatgacaacgacctgctgcgcatcgcgcgtcactactcgctgggc
ctggaccaactcgccgatcagctggatcgctcgctggagcgcctgaagacgggcagcacc
gcgacgccggcactctcaccgcatatcacgcggctgatcgagaaggcctggttgatcgcc
tccatcgaccacgaagtcgcgcatatccgcagcgggcacctgttgctggcgctgctggag
gacccggagctggcgcgcgtgatccgaagcgacatgccaggtctcgagaatcctttcgag
cgcatcgatgtcgctgacctgcgcctgcatttcaccagcctgttggccgccagtccggaa
gccgagctttcgcaatcaacgccgccagccgcgagcagcggcgggcagacggcaggtgag
ggtggtgccagcgcacgtccgggcagtcacaagaccccggcgctggatcaatacaccatc
gacctgaccgccagtgcgcgtgacggcaacatcgacccgatcctggggcgcgatgatgaa
gtgcgccagatgatcgacatcctgacgcgtcgtcgtcagaacaacccgatcctcaccggc
gaggcgggagtcggcaagacagcggtggtggaaggtctggcgcagaagatcgtcgctggc
gaagtgcccgcaccgctggcacgtgtcgagctgcgcaccctggacctcggcctgctgcag
gccggcgccagcgtgaagggcgaattcgagcagcgcctgaaggacgtgatcgaggaagtg
aagcgcagcctgcatcccatcatcctgttcatcgatgaagcccacactctgatcggcagt
ggcggtcaggcaggccagaacgatgccgccaacctgctcaagcccgcgctggcgcgtggc
gagctgcgcaccatcgccgccaccacctgggccgagtacaagaagtacttcgagaaggac
gccgccctggcgcgtcgcttccaggtgatcaaggtcgaggagccggccgagccgcaggcc
atcgacatgctgcgcgggctggcgacgcgcatgcgcgatcatcacaaggtcgagattctc
gatgacgccatcgtgcaggcggtgcgtctctccagccgctatatcaccggccgtcagctg
ccggacaaggcggtcagcgtgctggataccgcctgcgcgcgtgtcgcgctgggccagcag
accacgccggcaccgctgcaagatgcccgtcagcgcctgcgcgatctggaggccgagcgg
gaagcgctggcccgggaacacgagcgcggcgatgacagtcatgccccgcgtctggacgag
atcgacacggaagtactggccatcactgctcaggtcacggcgctggaagccgactggacg
cgtcagcgtgaggccgtcgaggcagtgctcaaggccgacgccgctctgaacgaggtgaat
gacaagagcaatgatgagggcagcgacgcggccaatgacgcggcccgtgaaagcgcactg
gaagaactgcgcgctgcgcgtgcggtgctggaagaggccggtggcgaggcaccgctggtg
cacgcctgtgtcgatggcaacgccatcggcgaggtcgtcgccgcctggaccggcatcccg
ctgggcaagatgcagcgtgacgagatcgacaccgtgcgtcgtctgccggcgctgttgggc
gagcgcgtactgggccaaggccacgccctggaagagatcggcaagcgcatcagcctgtca
cgcgccaagctcgaagacccgaacaagccgatcggtgtcttcatgctgctcggcccgagt
ggtgtcggcaagaccgaaaccgcgctggccctcgccgacaccctgtatggcggggagcgc
aatctgatcaccatcaacatgtccgagtaccaggaagcccacaccgtctcttcgctgaaa
ggctcgccgcccggctatgtcggctatggcgaaggcggcgtgctgactgaagccgtgcgt
cgcaagccgtacagcgtggtgctgctcgatgaagtcgagaaggcgcacccggacgtgctg
gaagtcttcttccaggtgttcgacaagggcgtgatggatgacggggaagggcgcgagatc
gacttccgcaactgcgtcatcctgctgacctccaacgtcggcaccgacgagatcatgaac
cgttgcctgggcgtggcgacgccgccggcgcccgaggcgctggtcgagggcctgcgcgat
accttgaatggtgtcttcaagccggccttcctcggccgtctcaaggtcgtgccgtactac
ccggtgcacagcgacatcctggcacgcatcgtcgacctcaagctgtcgcgtctggccgcg
cgcttcacgcgcaatcacggcgcccatctgagcttcgactcatcgcttgcgcatcatatc
gccgagcgttgcacccagaccgacagtggtgcacgcagcatcgaccatctgctcagcggt
tcgatgatgccgccgctggtggagtgggtactggagcgcatggccgatcagcagccggtg
ggtgacatccgcatcgcgttggatgacgccggccagttcacctacgagatgcagtga

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