KEGG   Cobetia sp. cqz5-12: F8A90_06885
Entry
F8A90_06885       CDS       T10568                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
cobc  Cobetia sp. cqz5-12
Pathway
cobc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F8A90_06885 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cobc02044]
    F8A90_06885 (tssI)
Secretion system [BR:cobc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   F8A90_06885 (tssI)
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 DUF6484 Gp5_trimer_C DUF3540
Other DBs
NCBI-ProteinID: QQK63879
LinkDB
Position
1612870..1615611
AA seq 913 aa
MAENSWLDSLLESFEISLDQNERLLTLEMSGADFIPHRLVGEERMSRPFAYTLDCISQNG
DIELKTLMAQPAALSVRQADGSYRKLSGLVESAALLGEDGGVFYYQLTLVPWMTMLKLGR
DSRIFQDLTAVEVIESVFSNHAIAQGEAQGGWRLDLRREYPARSYCVQYRESDFQFVNRL
MEQEGLFYYFEHASDDSDFNGHRLVITDDVATCAPVEPQVIRFHRQDATELEDSITQWSG
RRQQQPTRVSLGTFDYKQPGLEKRSGQDTRSDQGNLSEQEVYDYPGEYYFDDHSRGERLT
VNRLEAHESRAKRFYGAGGTRQLKVGRWFELSQHARHEDGDSSEREFLVLGLTVCAENAL
PVSAHLKALPGSLQARMAEARQAHGLNESAHEDYADVGTGQYLIDFESQRLSQPYRPSLD
HPRPNIGGPQTAIVVGPANEEIHTDSLNRVRVQFHWDRSEKGVADASCWLRVAQPNAGAG
WGSVFVPRIGQEVIVDFLEGDADRPLITGRVYNGDQTPQWHSNGLLSGLKSKTYRGNKYN
ELVFDDATDQERVRLNSEHEKSQLNLGYLIHQQGNTRGSFRGTGFELRSDAYGAIRAHQG
LLLTSWGQIAASGEQLDLTPAQQQLASAYQLSNTLSESATSHNAEALETRANLKQASEDA
QGRYGAEDSGTNFDGSSAASASAGGRGEAARLDAPWLHVSSPAGIALSTPESTHLAQGKS
LSITSGEDINLATGRSLIASLSEKFSLFVQRAGIKLFAARGKVEMQAQSDAMELTAEKDM
TITSTEGTVTLQAKNEILLTSGGGYIRLSGGNIEVHGPGKIDVKGAQHSFGGPTRLSKSL
TPLPDPQGIYSEFFTLKDEQTQVPLKYARYRITTAEGQVFEGRSDGEGRTQRVHTSSSQQ
MKVDVLDRLDDFA
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggcagagaattcctggctggatagcctgctggagtcgttcgagatttcactggatcag
aacgagcgcctgctcacgcttgagatgagtggtgcggacttcatcccgcatcgattggtg
ggggaagagcgcatgtcgcgtccctttgcctataccctcgactgcatttcccagaatggc
gatatcgagctcaagaccctgatggcgcagccggcggcgctctcggtgcgtcaggccgat
ggcagctaccgcaagctctcggggctggtcgagtcggccgcactgctgggtgaggacggc
ggcgtcttctattaccagctgacgctggtgccgtggatgacgatgctcaagctcggccgc
gacagccgcatcttccaggacctcaccgccgtcgaggtcatcgagtcggtgttctcgaac
cacgccatcgcgcagggcgaagcccagggtggctggcggctggacctgcgtcgcgagtat
ccggcgcgcagctactgcgtccaatatcgcgagagcgacttccagttcgtcaatcgcctg
atggagcaggaagggctgttctactactttgaacacgcctctgacgacagcgacttcaat
ggccaccgcctcgtcatcaccgacgatgtcgcgacctgtgcaccggtcgagccgcaggtc
atccgcttccaccgtcaggatgccaccgagcttgaagactccatcacccagtggagcggc
cgccgtcagcagcaaccgacgcgcgtcagcctcggcaccttcgattacaagcagccgggc
ctggaaaaacgttccggtcaggacacgcgcagcgatcagggcaacctcagcgagcaggaa
gtctacgactatcccggcgagtactactttgatgaccattcgcgcggcgaacgcctgacc
gtcaatcgcctcgaggcccatgaatcccgcgccaagcgcttctacggcgccgggggcacc
cgccagttgaaggtcggtcgctggttcgaactcagccagcacgcccgccatgaagacggc
gattccagtgagcgcgaatttctggtgctgggcctgaccgtttgtgccgagaatgcgctg
ccggtctccgcgcacctcaaggcgctaccgggcagcctgcaggcgcgcatggcggaggcg
cgccaggcgcatggcctcaatgaaagtgctcacgaagactacgccgatgtcggcaccggc
cagtacctgatcgactttgagagccagcgcctcagtcagccgtaccgtccgtcgctcgat
catccacggcccaacatcggcggcccgcagaccgcgattgtcgtcgggcccgcgaatgaa
gagatccacaccgactcgctcaaccgcgtgcgcgtgcagttccactgggatcgcagcgag
aagggcgtcgctgacgccagctgctggctgcgtgtcgcgcaacccaacgccggtgccggc
tggggcagcgtgttcgtgccgcgtatcggccaggaagtcatcgtcgatttcctcgaaggc
gacgcggatcggccgctgatcaccgggcgggtctacaacggcgaccagaccccgcaatgg
cactccaatggcctgctctccggcctcaagagcaagacctaccgcggtaacaagtacaac
gagctggtattcgatgacgccaccgatcaggagcgtgtgcgcctgaactcggagcacgag
aaatcccagctcaatctcggctacctgatccaccagcagggcaacacacgcggcagcttc
cgtggcaccggcttcgagctgcgttcggacgcctatggggcaatccgcgcgcatcagggc
ctgctgctgaccagctgggggcagatcgccgcaagtggcgaacagctcgacctcacgcct
gctcagcagcagttggccagcgcctatcagctctccaatacgctcagcgaaagcgccacc
agccataatgctgaggcgctcgagacgcgcgcgaacctcaagcaggccagtgaagatgcc
caggggcgctatggcgctgaagacagtggcaccaatttcgatggcagctctgccgcaagc
gccagcgcgggcgggcgtggtgaagccgcacgtctcgatgccccctggctgcatgtcagc
tcaccggcaggcatcgcgctgagtacgccggaatccacccatctggcgcagggcaagtca
ctcagcatcaccagcggcgaagacatcaatctggccaccggccgcagcctcattgcctcg
ctctccgaaaagttctcgctgttcgtgcaacgtgccggcatcaagctctttgctgcacgc
ggcaaggtggaaatgcaggcgcagagtgatgcgatggaactgacggccgagaaggatatg
accatcacctccaccgaaggcaccgtcaccctccaggccaagaacgagattctgctcacc
agcggcggcggctatatccgcctgagcggcggcaatatcgaagtgcacgggccgggcaag
attgatgtcaaaggtgcgcagcatagctttggcgggccgacgcgtttaagtaaatcactg
acccccttgcctgatcctcaaggtatttattccgaattctttactttgaaggatgaacag
acacaagttcctctcaagtatgcgagatatcgtataacaacggccgaaggacaggtgttt
gaagggcgtagtgacggtgaaggtcgtacacaacgcgtacatacatcttcctcgcagcag
atgaaagtcgatgtacttgatcggttagatgactttgcataa

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